Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL358472.5-202ENST00000641448 1267 ntBASIC23.05■■□□□ 1.28
ABCA3Q99758 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ABCA3Q99758 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC23.04■■□□□ 1.28
ABCA3Q99758 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC23.04■■□□□ 1.28
ABCA3Q99758 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC23.04■■□□□ 1.28
ABCA3Q99758 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ABCA3Q99758 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ABCA3Q99758 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ABCA3Q99758 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
ABCA3Q99758 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC23.04■■□□□ 1.28
ABCA3Q99758 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC23.04■■□□□ 1.28
ABCA3Q99758 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC23.04■■□□□ 1.28
ABCA3Q99758 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC23.04■■□□□ 1.28
ABCA3Q99758 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC23.04■■□□□ 1.28
ABCA3Q99758 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ABCA3Q99758 AC022144.1-201ENST00000602255 1580 ntBASIC23.04■■□□□ 1.28
ABCA3Q99758 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ABCA3Q99758 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCA3Q99758 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCA3Q99758 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCA3Q99758 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
ABCA3Q99758 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCA3Q99758 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
ABCA3Q99758 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCA3Q99758 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ABCA3Q99758 AL031055.1-201ENST00000606362 631 ntBASIC23.03■■□□□ 1.28
ABCA3Q99758 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ABCA3Q99758 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ABCA3Q99758 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ABCA3Q99758 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC23.03■■□□□ 1.28
ABCA3Q99758 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ABCA3Q99758 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC23.02■■□□□ 1.28
ABCA3Q99758 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
ABCA3Q99758 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC23.02■■□□□ 1.28
ABCA3Q99758 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC23.02■■□□□ 1.28
ABCA3Q99758 ATP5G2P4-201ENST00000442175 420 ntBASIC23.02■■□□□ 1.28
ABCA3Q99758 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
ABCA3Q99758 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ABCA3Q99758 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC23.02■■□□□ 1.28
ABCA3Q99758 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC23.02■■□□□ 1.28
ABCA3Q99758 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ABCA3Q99758 AL662799.1-202ENST00000614205 422 ntBASIC23.02■■□□□ 1.28
ABCA3Q99758 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
ABCA3Q99758 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC23.02■■□□□ 1.28
ABCA3Q99758 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
ABCA3Q99758 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ABCA3Q99758 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC23.02■■□□□ 1.28
ABCA3Q99758 AC109635.5-201ENST00000533593 962 ntBASIC23.02■■□□□ 1.28
ABCA3Q99758 CR383656.12-201ENST00000549567 513 ntBASIC23.02■■□□□ 1.28
ABCA3Q99758 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC23.02■■□□□ 1.28
ABCA3Q99758 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC23.02■■□□□ 1.28
ABCA3Q99758 AL008721.1-201ENST00000609964 604 ntBASIC23.02■■□□□ 1.28
ABCA3Q99758 AC073592.8-201ENST00000624126 511 ntBASIC23.02■■□□□ 1.28
ABCA3Q99758 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
ABCA3Q99758 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ABCA3Q99758 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC23.01■■□□□ 1.27
ABCA3Q99758 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ABCA3Q99758 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ABCA3Q99758 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC23.01■■□□□ 1.27
ABCA3Q99758 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
ABCA3Q99758 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC23.01■■□□□ 1.27
ABCA3Q99758 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ABCA3Q99758 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ABCA3Q99758 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC23.01■■□□□ 1.27
ABCA3Q99758 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC23.01■■□□□ 1.27
ABCA3Q99758 IGHV3-71-201ENST00000523324 359 ntBASIC23.01■■□□□ 1.27
ABCA3Q99758 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC23.01■■□□□ 1.27
ABCA3Q99758 AC005412.3-201ENST00000580309 715 ntBASIC23.01■■□□□ 1.27
ABCA3Q99758 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC23.01■■□□□ 1.27
ABCA3Q99758 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ABCA3Q99758 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ABCA3Q99758 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
ABCA3Q99758 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
ABCA3Q99758 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC23.01■■□□□ 1.27
ABCA3Q99758 NARF-206ENST00000457415 1668 ntTSL 5 BASIC23.01■■□□□ 1.27
ABCA3Q99758 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ABCA3Q99758 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
ABCA3Q99758 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
ABCA3Q99758 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23■■□□□ 1.27
ABCA3Q99758 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ABCA3Q99758 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ABCA3Q99758 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC23■■□□□ 1.27
ABCA3Q99758 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
ABCA3Q99758 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC23■■□□□ 1.27
ABCA3Q99758 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
ABCA3Q99758 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC23■■□□□ 1.27
ABCA3Q99758 AC004790.1-201ENST00000612686 536 ntBASIC23■■□□□ 1.27
ABCA3Q99758 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC23■■□□□ 1.27
ABCA3Q99758 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
ABCA3Q99758 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ABCA3Q99758 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ABCA3Q99758 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC23■■□□□ 1.27
ABCA3Q99758 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23■■□□□ 1.27
ABCA3Q99758 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC23■■□□□ 1.27
ABCA3Q99758 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 RNU1-129P-201ENST00000384064 167 ntBASIC22.99■■□□□ 1.27
ABCA3Q99758 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms