Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.07■□□□□ 0.32
PRPF18Q99633 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PRPF18Q99633 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.07■□□□□ 0.32
PRPF18Q99633 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PRPF18Q99633 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PRPF18Q99633 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.07■□□□□ 0.32
PRPF18Q99633 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.07■□□□□ 0.32
PRPF18Q99633 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.07■□□□□ 0.32
PRPF18Q99633 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.07■□□□□ 0.32
PRPF18Q99633 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.07■□□□□ 0.32
PRPF18Q99633 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.07■□□□□ 0.32
PRPF18Q99633 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.07■□□□□ 0.32
PRPF18Q99633 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRPF18Q99633 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.06■□□□□ 0.32
PRPF18Q99633 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.06■□□□□ 0.32
PRPF18Q99633 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PRPF18Q99633 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.06■□□□□ 0.32
PRPF18Q99633 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
PRPF18Q99633 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.06■□□□□ 0.32
PRPF18Q99633 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.06■□□□□ 0.32
PRPF18Q99633 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PRPF18Q99633 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.06■□□□□ 0.32
PRPF18Q99633 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.06■□□□□ 0.32
PRPF18Q99633 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.06■□□□□ 0.32
PRPF18Q99633 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PRPF18Q99633 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.06■□□□□ 0.32
PRPF18Q99633 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PRPF18Q99633 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PRPF18Q99633 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PRPF18Q99633 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
PRPF18Q99633 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PRPF18Q99633 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
PRPF18Q99633 KRT89P-201ENST00000620027 1478 ntBASIC17.05■□□□□ 0.32
PRPF18Q99633 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRPF18Q99633 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRPF18Q99633 LINC00167-201ENST00000530583 1419 ntBASIC17.05■□□□□ 0.32
PRPF18Q99633 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRPF18Q99633 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRPF18Q99633 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRPF18Q99633 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRPF18Q99633 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PRPF18Q99633 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.05■□□□□ 0.32
PRPF18Q99633 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRPF18Q99633 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRPF18Q99633 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRPF18Q99633 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.05■□□□□ 0.32
PRPF18Q99633 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.05■□□□□ 0.32
PRPF18Q99633 LIN28AP1-201ENST00000429574 405 ntBASIC17.05■□□□□ 0.32
PRPF18Q99633 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.05■□□□□ 0.32
PRPF18Q99633 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.05■□□□□ 0.32
PRPF18Q99633 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.05■□□□□ 0.32
PRPF18Q99633 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.05■□□□□ 0.32
PRPF18Q99633 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRPF18Q99633 AC024563.2-201ENST00000603282 481 ntBASIC17.05■□□□□ 0.32
PRPF18Q99633 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRPF18Q99633 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRPF18Q99633 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms