Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG4P5Q96PW8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG4P5Q96PW8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.06■□□□□ 0.48
CSPG4P5Q96PW8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CSPG4P5Q96PW8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CSPG4P5Q96PW8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CSPG4P5Q96PW8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 AC012313.1-201ENST00000593393 3059 ntBASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 NUS1P2-201ENST00000417358 873 ntBASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CSPG4P5Q96PW8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 AC116353.5-201ENST00000638148 1699 ntBASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 HCG4P8-203ENST00000443049 980 ntBASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 MIR5100-201ENST00000579544 119 ntBASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 AC138894.3-201ENST00000603787 634 ntBASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 AC073592.5-201ENST00000624854 528 ntBASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CSPG4P5Q96PW8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 AC020916.1-201ENST00000587762 1774 ntBASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 AC080080.1-201ENST00000625121 2420 ntBASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 PMPCAP1-201ENST00000508114 1576 ntBASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 AC009336.1-201ENST00000608941 1553 ntBASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CSPG4P5Q96PW8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms