Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 AL022326.1-202ENST00000641533 845 ntBASIC14.26□□□□□ -0.13
ZNF48Q96MX3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF48Q96MX3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 AL591424.1-201ENST00000442569 1213 ntBASIC14.25□□□□□ -0.13
ZNF48Q96MX3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.25□□□□□ -0.13
ZNF48Q96MX3 REXO1L9P-201ENST00000604264 2108 ntBASIC14.25□□□□□ -0.13
ZNF48Q96MX3 AC055717.3-201ENST00000622967 595 ntBASIC14.25□□□□□ -0.13
ZNF48Q96MX3 AC073592.4-201ENST00000623827 446 ntBASIC14.25□□□□□ -0.13
ZNF48Q96MX3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 GNAS-203ENST00000306120 1878 ntBASIC14.25□□□□□ -0.13
ZNF48Q96MX3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
ZNF48Q96MX3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 AC005104.2-201ENST00000427818 678 ntBASIC14.24□□□□□ -0.13
ZNF48Q96MX3 AC007967.2-201ENST00000432613 625 ntBASIC14.24□□□□□ -0.13
ZNF48Q96MX3 AC092183.1-201ENST00000469884 875 ntBASIC14.24□□□□□ -0.13
ZNF48Q96MX3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF48Q96MX3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms