Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM47Q96LD4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.48■□□□□ 0.87
TRIM47Q96LD4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM47Q96LD4 LINC01126-201ENST00000623515 1646 ntBASIC20.48■□□□□ 0.87
TRIM47Q96LD4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM47Q96LD4 AC004817.3-201ENST00000602957 2129 ntBASIC20.48■□□□□ 0.87
TRIM47Q96LD4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM47Q96LD4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM47Q96LD4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 AC002310.6-201ENST00000624451 1377 ntBASIC20.47■□□□□ 0.87
TRIM47Q96LD4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 AC136632.2-201ENST00000512891 861 ntBASIC20.47■□□□□ 0.87
TRIM47Q96LD4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TRIM47Q96LD4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 CNN2P11-201ENST00000429351 262 ntBASIC20.46■□□□□ 0.87
TRIM47Q96LD4 AC007967.3-201ENST00000434308 558 ntBASIC20.46■□□□□ 0.87
TRIM47Q96LD4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 AC073592.4-201ENST00000623827 446 ntBASIC20.46■□□□□ 0.87
TRIM47Q96LD4 NOC2LP2-201ENST00000407594 1944 ntBASIC20.46■□□□□ 0.87
TRIM47Q96LD4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 PMPCAP1-201ENST00000508114 1576 ntBASIC20.46■□□□□ 0.87
TRIM47Q96LD4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM47Q96LD4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 AP002472.1-201ENST00000577490 586 ntBASIC20.45■□□□□ 0.86
TRIM47Q96LD4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 C20orf181-201ENST00000623918 480 ntBASIC20.45■□□□□ 0.86
TRIM47Q96LD4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
TRIM47Q96LD4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM47Q96LD4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms