Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
CALR3Q96L12 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CALR3Q96L12 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.56■□□□□ 0.56
CALR3Q96L12 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.55■□□□□ 0.56
CALR3Q96L12 LINC02012-201ENST00000608206 1725 ntBASIC18.55■□□□□ 0.56
CALR3Q96L12 AGGF1P2-201ENST00000426656 2106 ntBASIC18.55■□□□□ 0.56
CALR3Q96L12 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 SPDYE15P-201ENST00000424157 909 ntBASIC18.55■□□□□ 0.56
CALR3Q96L12 HOMER2P1-201ENST00000455653 964 ntBASIC18.55■□□□□ 0.56
CALR3Q96L12 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.55■□□□□ 0.56
CALR3Q96L12 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.55■□□□□ 0.56
CALR3Q96L12 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CALR3Q96L12 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CALR3Q96L12 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CALR3Q96L12 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.55■□□□□ 0.56
CALR3Q96L12 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CALR3Q96L12 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.55■□□□□ 0.56
CALR3Q96L12 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CALR3Q96L12 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
CALR3Q96L12 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.54■□□□□ 0.56
CALR3Q96L12 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.54■□□□□ 0.56
CALR3Q96L12 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.54■□□□□ 0.56
CALR3Q96L12 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.54■□□□□ 0.56
CALR3Q96L12 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.54■□□□□ 0.56
CALR3Q96L12 AC011558.1-201ENST00000623459 338 ntBASIC18.54■□□□□ 0.56
CALR3Q96L12 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CALR3Q96L12 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CALR3Q96L12 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CALR3Q96L12 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.54■□□□□ 0.56
CALR3Q96L12 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CALR3Q96L12 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.54■□□□□ 0.56
CALR3Q96L12 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CALR3Q96L12 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CALR3Q96L12 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 AC087499.1-201ENST00000418141 1075 ntBASIC18.53■□□□□ 0.56
CALR3Q96L12 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.53■□□□□ 0.56
CALR3Q96L12 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.53■□□□□ 0.56
CALR3Q96L12 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CALR3Q96L12 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.53■□□□□ 0.56
CALR3Q96L12 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.53■□□□□ 0.56
CALR3Q96L12 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.53■□□□□ 0.56
CALR3Q96L12 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.53■□□□□ 0.56
CALR3Q96L12 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CALR3Q96L12 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.53■□□□□ 0.56
CALR3Q96L12 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CALR3Q96L12 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.53■□□□□ 0.56
CALR3Q96L12 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CALR3Q96L12 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms