Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TIMD4Q96H15 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TIMD4Q96H15 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.72□□□□□ -0.05
TIMD4Q96H15 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TIMD4Q96H15 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TIMD4Q96H15 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TIMD4Q96H15 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TIMD4Q96H15 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TIMD4Q96H15 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TIMD4Q96H15 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TIMD4Q96H15 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TIMD4Q96H15 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 PRYP5-201ENST00000451909 266 ntBASIC14.71□□□□□ -0.05
TIMD4Q96H15 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 AC107918.4-202ENST00000641623 219 ntBASIC14.71□□□□□ -0.05
TIMD4Q96H15 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 AL049757.1-201ENST00000616842 1596 ntBASIC14.71□□□□□ -0.05
TIMD4Q96H15 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.71□□□□□ -0.05
TIMD4Q96H15 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
TIMD4Q96H15 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
TIMD4Q96H15 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
TIMD4Q96H15 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TIMD4Q96H15 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.71□□□□□ -0.06
TIMD4Q96H15 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.71□□□□□ -0.06
TIMD4Q96H15 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TIMD4Q96H15 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TIMD4Q96H15 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TIMD4Q96H15 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 IL9RP2-201ENST00000423948 1312 ntBASIC14.7□□□□□ -0.06
TIMD4Q96H15 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.7□□□□□ -0.06
TIMD4Q96H15 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 AC105339.3-201ENST00000560043 636 ntBASIC14.7□□□□□ -0.06
TIMD4Q96H15 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 AC025062.2-201ENST00000605477 670 ntBASIC14.7□□□□□ -0.06
TIMD4Q96H15 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 AC008735.5-201ENST00000623544 497 ntBASIC14.7□□□□□ -0.06
TIMD4Q96H15 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 ZNF259P1-201ENST00000407656 1365 ntBASIC14.7□□□□□ -0.06
TIMD4Q96H15 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TIMD4Q96H15 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TIMD4Q96H15 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms