Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 AC139887.3-201ENST00000568585 713 ntBASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 AL049840.3-201ENST00000602669 611 ntBASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 AC006557.2-201ENST00000592985 1240 ntBASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCD1Q96GM5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 LYSMD4-203ENST00000378904 2122 ntBASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 AC243591.1-201ENST00000452967 1364 ntBASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCD1Q96GM5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMARCD1Q96GM5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SMARCD1Q96GM5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.39■□□□□ 0.54
SMARCD1Q96GM5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMARCD1Q96GM5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.39■□□□□ 0.54
SMARCD1Q96GM5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 AC105339.3-201ENST00000560043 636 ntBASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 AC012640.2-201ENST00000561606 901 ntBASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCD1Q96GM5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms