Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 LIN28AP1-201ENST00000429574 405 ntBASIC15.27■□□□□ 0.04
CPNE2Q96FN4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 AC140113.3-201ENST00000605663 199 ntBASIC15.27■□□□□ 0.04
CPNE2Q96FN4 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.27■□□□□ 0.04
CPNE2Q96FN4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE2Q96FN4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE2Q96FN4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE2Q96FN4 AC068418.2-201ENST00000577309 3703 ntBASIC15.27■□□□□ 0.03
CPNE2Q96FN4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.27■□□□□ 0.03
CPNE2Q96FN4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE2Q96FN4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE2Q96FN4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE2Q96FN4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE2Q96FN4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE2Q96FN4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.27■□□□□ 0.03
CPNE2Q96FN4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CPNE2Q96FN4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.27■□□□□ 0.03
CPNE2Q96FN4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.27■□□□□ 0.03
CPNE2Q96FN4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE2Q96FN4 AC009949.1-201ENST00000623048 1830 ntBASIC15.27■□□□□ 0.03
CPNE2Q96FN4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 AL121761.2-201ENST00000598007 1648 ntBASIC15.26■□□□□ 0.03
CPNE2Q96FN4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 KRT18P48-201ENST00000434763 852 ntBASIC15.26■□□□□ 0.03
CPNE2Q96FN4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE2Q96FN4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE2Q96FN4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms