Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 UNC93B7-201ENST00000509439 705 ntBASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 LINC01711-201ENST00000598340 967 ntBASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 IFNL4P1-201ENST00000607083 540 ntBASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.21■□□□□ 0.19
CTHRC1Q96CG8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CTHRC1Q96CG8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTHRC1Q96CG8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.21■□□□□ 0.18
CTHRC1Q96CG8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.21■□□□□ 0.18
CTHRC1Q96CG8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CTHRC1Q96CG8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTHRC1Q96CG8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 SAPCD2P3-201ENST00000455031 850 ntBASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 FGFR3P6-201ENST00000457012 610 ntBASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 MTDHP3-201ENST00000594186 672 ntBASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 AL139288.1-201ENST00000623748 933 ntBASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTHRC1Q96CG8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 AF238378.1-201ENST00000526806 358 ntBASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 NKAPP1-205ENST00000585790 367 ntBASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 AL356309.3-201ENST00000624132 1934 ntBASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 AC093525.9-201ENST00000624961 1746 ntBASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.19■□□□□ 0.18
CTHRC1Q96CG8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTHRC1Q96CG8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms