Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 PMS2P7-201ENST00000506558 1336 ntBASIC22.83■■□□□ 1.25
RTF1Q92541 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RTF1Q92541 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RTF1Q92541 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RTF1Q92541 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
RTF1Q92541 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.25
RTF1Q92541 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
RTF1Q92541 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
RTF1Q92541 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RTF1Q92541 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
RTF1Q92541 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
RTF1Q92541 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RTF1Q92541 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.83■■□□□ 1.25
RTF1Q92541 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.83■■□□□ 1.25
RTF1Q92541 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
RTF1Q92541 ELK2BP-201ENST00000415014 1224 ntBASIC22.83■■□□□ 1.25
RTF1Q92541 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC22.83■■□□□ 1.25
RTF1Q92541 AL139424.1-201ENST00000607572 797 ntBASIC22.83■■□□□ 1.25
RTF1Q92541 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
RTF1Q92541 LINC01451-201ENST00000623792 534 ntBASIC22.83■■□□□ 1.25
RTF1Q92541 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RTF1Q92541 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
RTF1Q92541 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
RTF1Q92541 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC22.83■■□□□ 1.25
RTF1Q92541 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RTF1Q92541 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
RTF1Q92541 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC22.83■■□□□ 1.24
RTF1Q92541 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
RTF1Q92541 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC22.83■■□□□ 1.24
RTF1Q92541 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RTF1Q92541 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.82■■□□□ 1.24
RTF1Q92541 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC22.82■■□□□ 1.24
RTF1Q92541 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC22.82■■□□□ 1.24
RTF1Q92541 AMT-250ENST00000637682 1823 ntTSL 5 BASIC22.82■■□□□ 1.24
RTF1Q92541 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.82■■□□□ 1.24
RTF1Q92541 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
RTF1Q92541 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.82■■□□□ 1.24
RTF1Q92541 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.82■■□□□ 1.24
RTF1Q92541 AC009947.1-201ENST00000444350 727 ntBASIC22.82■■□□□ 1.24
RTF1Q92541 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.82■■□□□ 1.24
RTF1Q92541 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RTF1Q92541 AC012317.2-201ENST00000623305 2251 ntBASIC22.82■■□□□ 1.24
RTF1Q92541 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
RTF1Q92541 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.81■■□□□ 1.24
RTF1Q92541 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RTF1Q92541 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RTF1Q92541 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RTF1Q92541 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.81■■□□□ 1.24
RTF1Q92541 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC22.81■■□□□ 1.24
RTF1Q92541 MED15P5-201ENST00000423150 992 ntBASIC22.81■■□□□ 1.24
RTF1Q92541 SLC25A6P5-201ENST00000435663 894 ntBASIC22.81■■□□□ 1.24
RTF1Q92541 AL591424.1-201ENST00000442569 1213 ntBASIC22.81■■□□□ 1.24
RTF1Q92541 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RTF1Q92541 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.81■■□□□ 1.24
RTF1Q92541 AC140113.2-201ENST00000604370 208 ntBASIC22.81■■□□□ 1.24
RTF1Q92541 FAM197Y3-203ENST00000618346 717 ntBASIC22.81■■□□□ 1.24
RTF1Q92541 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
RTF1Q92541 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RTF1Q92541 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
RTF1Q92541 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RTF1Q92541 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC22.81■■□□□ 1.24
RTF1Q92541 NME9-203ENST00000383180 2133 ntTSL 2 BASIC22.81■■□□□ 1.24
RTF1Q92541 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
RTF1Q92541 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC22.81■■□□□ 1.24
RTF1Q92541 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RTF1Q92541 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RTF1Q92541 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC22.8■■□□□ 1.24
RTF1Q92541 AL390961.4-201ENST00000623958 2535 ntBASIC22.8■■□□□ 1.24
RTF1Q92541 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RTF1Q92541 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RTF1Q92541 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RTF1Q92541 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RTF1Q92541 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RTF1Q92541 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC22.8■■□□□ 1.24
RTF1Q92541 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RTF1Q92541 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RTF1Q92541 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RTF1Q92541 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RTF1Q92541 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC22.8■■□□□ 1.24
RTF1Q92541 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.8■■□□□ 1.24
RTF1Q92541 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC22.8■■□□□ 1.24
RTF1Q92541 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.8■■□□□ 1.24
RTF1Q92541 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
RTF1Q92541 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.8■■□□□ 1.24
RTF1Q92541 AC006116.8-202ENST00000587620 1550 ntBASIC22.8■■□□□ 1.24
RTF1Q92541 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
RTF1Q92541 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms