Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 AL390754.1-201ENST00000619088 582 ntBASIC18.67■□□□□ 0.58
HERVK_113Q902F9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 CRB3P1-201ENST00000449338 276 ntBASIC18.66■□□□□ 0.58
HERVK_113Q902F9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 AL158211.3-201ENST00000607385 239 ntBASIC18.66■□□□□ 0.58
HERVK_113Q902F9 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 AL358472.5-202ENST00000641448 1267 ntBASIC18.66■□□□□ 0.58
HERVK_113Q902F9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.66■□□□□ 0.58
HERVK_113Q902F9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 AC008677.1-201ENST00000519230 1561 ntBASIC18.65■□□□□ 0.58
HERVK_113Q902F9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 OR8S1-201ENST00000310194 1080 ntBASIC18.65■□□□□ 0.58
HERVK_113Q902F9 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.65■□□□□ 0.58
HERVK_113Q902F9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 SPCS2P4-201ENST00000436160 681 ntBASIC18.65■□□□□ 0.58
HERVK_113Q902F9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 AL512638.1-201ENST00000457493 794 ntBASIC18.65■□□□□ 0.58
HERVK_113Q902F9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 IGHV3-42-201ENST00000520410 361 ntBASIC18.65■□□□□ 0.58
HERVK_113Q902F9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 AC026150.2-201ENST00000564693 1156 ntBASIC18.65■□□□□ 0.58
HERVK_113Q902F9 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERVK_113Q902F9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HERVK_113Q902F9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HERVK_113Q902F9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.64■□□□□ 0.57
HERVK_113Q902F9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HERVK_113Q902F9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HERVK_113Q902F9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERVK_113Q902F9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HERVK_113Q902F9 SPDYE7P-202ENST00000420373 878 ntBASIC18.64■□□□□ 0.57
HERVK_113Q902F9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.64■□□□□ 0.57
HERVK_113Q902F9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERVK_113Q902F9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms