Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
U2AF1L4Q8WU68 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 AC108073.2-201ENST00000464002 357 ntBASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
U2AF1L4Q8WU68 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
U2AF1L4Q8WU68 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
U2AF1L4Q8WU68 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.02■□□□□ 0.79
U2AF1L4Q8WU68 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 AC007967.3-201ENST00000434308 558 ntBASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 AP000344.2-201ENST00000512987 629 ntBASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 AC004449.1-201ENST00000564240 433 ntBASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.01■□□□□ 0.79
U2AF1L4Q8WU68 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 MIR4745-201ENST00000577608 62 ntBASIC20■□□□□ 0.79
U2AF1L4Q8WU68 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 AL589182.2-201ENST00000619332 1049 ntBASIC20■□□□□ 0.79
U2AF1L4Q8WU68 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
U2AF1L4Q8WU68 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
U2AF1L4Q8WU68 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms