Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 AP002414.3-201ENST00000589352 1468 ntBASIC17.62■□□□□ 0.41
CHD5Q8TDI0 EGFEM1P-202ENST00000431685 1563 ntBASIC17.62■□□□□ 0.41
CHD5Q8TDI0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 PCDHB18P-201ENST00000524813 2368 ntBASIC17.62■□□□□ 0.41
CHD5Q8TDI0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD5Q8TDI0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 AC141586.5-201ENST00000624546 2050 ntBASIC17.61■□□□□ 0.41
CHD5Q8TDI0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 SLC25A1P1-201ENST00000528351 927 ntBASIC17.61■□□□□ 0.41
CHD5Q8TDI0 AC105339.3-201ENST00000560043 636 ntBASIC17.61■□□□□ 0.41
CHD5Q8TDI0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 AC004706.3-202ENST00000621574 984 ntBASIC17.61■□□□□ 0.41
CHD5Q8TDI0 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD5Q8TDI0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 PAWRP1-201ENST00000451083 565 ntBASIC17.6■□□□□ 0.41
CHD5Q8TDI0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD5Q8TDI0 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.6■□□□□ 0.41
CHD5Q8TDI0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 AC010654.1-201ENST00000615722 808 ntBASIC17.59■□□□□ 0.41
CHD5Q8TDI0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.59■□□□□ 0.41
CHD5Q8TDI0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD5Q8TDI0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms