Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 LINC00896-202ENST00000609602 2128 ntBASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 ABCD1P5-201ENST00000445663 754 ntBASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CCDC148Q8NFR7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 AC003669.1-201ENST00000334569 611 ntBASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 DUSP5P1-201ENST00000441325 1139 ntBASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 AL139327.4-201ENST00000612362 153 ntBASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 AL138688.1-201ENST00000624851 1594 ntBASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC148Q8NFR7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 STK25P1-201ENST00000585406 838 ntBASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 AC073592.5-201ENST00000624854 528 ntBASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 AP000867.4-201ENST00000641616 219 ntBASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC148Q8NFR7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 PMPCAP1-201ENST00000508114 1576 ntBASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 KLF4P1-201ENST00000412782 1185 ntBASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 AC132008.2-207ENST00000454517 770 ntBASIC20.17■□□□□ 0.82
CCDC148Q8NFR7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms