Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 PTCHD3P2-201ENST00000424937 1205 ntBASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 TSPY9P-201ENST00000440215 945 ntBASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 TSPY11P-201ENST00000442607 1045 ntBASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 SLC47A1P1-202ENST00000449666 945 ntBASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 AC136469.2-201ENST00000623944 1028 ntBASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 KRT8P33-201ENST00000508125 1423 ntBASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC9.62□□□□□ -0.87
SPTSSBQ8NFR3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SPTSSBQ8NFR3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms