Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NUP43Q8NFH3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 AC233702.3-201ENST00000578656 1387 ntBASIC16.41■□□□□ 0.22
NUP43Q8NFH3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 ARMC10P1-201ENST00000313754 855 ntBASIC16.41■□□□□ 0.22
NUP43Q8NFH3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 MYCLP1-201ENST00000372451 1075 ntBASIC16.41■□□□□ 0.22
NUP43Q8NFH3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 AP002383.4-201ENST00000442518 975 ntBASIC16.41■□□□□ 0.22
NUP43Q8NFH3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 AP005901.3-202ENST00000581653 237 ntBASIC16.41■□□□□ 0.22
NUP43Q8NFH3 AC019129.2-201ENST00000609837 1235 ntBASIC16.41■□□□□ 0.22
NUP43Q8NFH3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 AL358472.4-201ENST00000633140 710 ntBASIC16.41■□□□□ 0.22
NUP43Q8NFH3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 AC016396.2-201ENST00000562575 1417 ntBASIC16.41■□□□□ 0.22
NUP43Q8NFH3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NUP43Q8NFH3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 AC012313.1-201ENST00000593393 3059 ntBASIC16.4■□□□□ 0.22
NUP43Q8NFH3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 AC103564.2-201ENST00000432853 1299 ntBASIC16.4■□□□□ 0.22
NUP43Q8NFH3 DRAXINP1-201ENST00000437611 948 ntBASIC16.4■□□□□ 0.22
NUP43Q8NFH3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 TPSP2-201ENST00000561760 610 ntBASIC16.4■□□□□ 0.22
NUP43Q8NFH3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 Z69720.1-201ENST00000601483 472 ntBASIC16.4■□□□□ 0.22
NUP43Q8NFH3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.4■□□□□ 0.22
NUP43Q8NFH3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
NUP43Q8NFH3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
NUP43Q8NFH3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NUP43Q8NFH3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms