Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 ELK2BP-201ENST00000415014 1224 ntBASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 AC112482.1-201ENST00000492080 688 ntBASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 MIR3687-2-201ENST00000577708 61 ntBASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 MIR3687-1-201ENST00000614492 61 ntBASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 AP000997.3-201ENST00000623333 2250 ntBASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCBTB1Q8NDN9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 AC019129.2-201ENST00000609837 1235 ntBASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 AC004706.3-202ENST00000621574 984 ntBASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCBTB1Q8NDN9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 AC002347.1-201ENST00000569543 541 ntBASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.8■□□□□ 0.28
RCBTB1Q8NDN9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms