Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 AC084121.4-201ENST00000641598 221 ntBASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 AF228730.8-201ENST00000642140 221 ntBASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC168Q8NDH2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC168Q8NDH2 AL512384.1-201ENST00000406683 331 ntBASIC14.52□□□□□ -0.08
CCDC168Q8NDH2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC168Q8NDH2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC168Q8NDH2 FAM8A2P-201ENST00000528813 1142 ntBASIC14.52□□□□□ -0.08
CCDC168Q8NDH2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC168Q8NDH2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC168Q8NDH2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.52□□□□□ -0.08
CCDC168Q8NDH2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC168Q8NDH2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC168Q8NDH2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 TREML5P-201ENST00000421694 576 ntBASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 AC092658.1-201ENST00000505836 891 ntBASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC168Q8NDH2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 AL161938.1-201ENST00000569833 2180 ntBASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 AC098614.1-201ENST00000368528 745 ntBASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 GIMAP3P-201ENST00000495150 836 ntBASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 AC132938.2-201ENST00000579188 680 ntBASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 MIR4525-201ENST00000580000 75 ntBASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC168Q8NDH2 SPTSSB-204ENST00000617024 1292 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms