Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1AQ8N9B8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
RASGEF1AQ8N9B8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1AQ8N9B8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1AQ8N9B8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RASGEF1AQ8N9B8 LYSMD4-203ENST00000378904 2122 ntBASIC17.26■□□□□ 0.35
RASGEF1AQ8N9B8 AC004817.3-201ENST00000602957 2129 ntBASIC17.26■□□□□ 0.35
RASGEF1AQ8N9B8 LINC00896-202ENST00000609602 2128 ntBASIC17.26■□□□□ 0.35
RASGEF1AQ8N9B8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RASGEF1AQ8N9B8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
RASGEF1AQ8N9B8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RASGEF1AQ8N9B8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 AC148477.5-201ENST00000625164 1645 ntBASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RASGEF1AQ8N9B8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 AC009336.1-201ENST00000608941 1553 ntBASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 SIGLEC16-201ENST00000599858 1437 ntBASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 AL020989.1-201ENST00000422979 469 ntBASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 BX005266.1-201ENST00000473402 457 ntBASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 AL139288.1-201ENST00000623748 933 ntBASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RASGEF1AQ8N9B8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 SCARNA2-201ENST00000458748 420 ntBASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 AL160237.2-201ENST00000556165 472 ntBASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.23■□□□□ 0.35
RASGEF1AQ8N9B8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms