Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 AL353593.2-201ENST00000602529 1483 ntBASIC13.69□□□□□ -0.22
C3orf56Q8N813 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 AC005225.4-201ENST00000557330 545 ntBASIC13.69□□□□□ -0.22
C3orf56Q8N813 AC093520.2-201ENST00000561830 333 ntBASIC13.69□□□□□ -0.22
C3orf56Q8N813 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 AL353135.1-201ENST00000606729 504 ntBASIC13.69□□□□□ -0.22
C3orf56Q8N813 REXO1L3P-201ENST00000622202 1288 ntBASIC13.69□□□□□ -0.22
C3orf56Q8N813 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.69□□□□□ -0.22
C3orf56Q8N813 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 AC010460.3-201ENST00000511359 1579 ntBASIC13.69□□□□□ -0.22
C3orf56Q8N813 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
C3orf56Q8N813 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 KLF4P1-201ENST00000412782 1185 ntBASIC13.68□□□□□ -0.22
C3orf56Q8N813 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 RHOQP3-201ENST00000437982 621 ntBASIC13.68□□□□□ -0.22
C3orf56Q8N813 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 AL805961.1-202ENST00000641562 540 ntBASIC13.68□□□□□ -0.22
C3orf56Q8N813 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C3orf56Q8N813 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
C3orf56Q8N813 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
C3orf56Q8N813 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C3orf56Q8N813 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C3orf56Q8N813 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C3orf56Q8N813 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C3orf56Q8N813 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.67□□□□□ -0.22
C3orf56Q8N813 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C3orf56Q8N813 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.67□□□□□ -0.22
C3orf56Q8N813 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C3orf56Q8N813 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C3orf56Q8N813 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
C3orf56Q8N813 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
C3orf56Q8N813 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.67□□□□□ -0.22
C3orf56Q8N813 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C3orf56Q8N813 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C3orf56Q8N813 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
C3orf56Q8N813 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C3orf56Q8N813 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C3orf56Q8N813 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C3orf56Q8N813 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.67□□□□□ -0.22
C3orf56Q8N813 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.67□□□□□ -0.22
C3orf56Q8N813 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms