Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH20Q8N6Y1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH20Q8N6Y1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH20Q8N6Y1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH20Q8N6Y1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH20Q8N6Y1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH20Q8N6Y1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH20Q8N6Y1 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 AD001527.2-201ENST00000622994 785 ntBASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 AC106820.2-201ENST00000563775 3264 ntBASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDH20Q8N6Y1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 SCARNA2-201ENST00000458748 420 ntBASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 GNAS-203ENST00000306120 1878 ntBASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH20Q8N6Y1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDH20Q8N6Y1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDH20Q8N6Y1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
PCDH20Q8N6Y1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
PCDH20Q8N6Y1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH20Q8N6Y1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDH20Q8N6Y1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH20Q8N6Y1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH20Q8N6Y1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH20Q8N6Y1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH20Q8N6Y1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCDH20Q8N6Y1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms