Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ARHGEF39Q8N4T4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ARHGEF39Q8N4T4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 AC018470.1-201ENST00000624790 3129 ntBASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ARHGEF39Q8N4T4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 AC020763.4-201ENST00000623414 4170 ntBASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 AL353135.1-201ENST00000606729 504 ntBASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 AC116407.3-201ENST00000623905 1129 ntBASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 AL138688.1-201ENST00000624851 1594 ntBASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ARHGEF39Q8N4T4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 NCF1C-201ENST00000438382 1427 ntBASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 RPS2P28-201ENST00000314255 741 ntBASIC16.48■□□□□ 0.23
ARHGEF39Q8N4T4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms