Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.17■□□□□ 0.5
SCML4Q8N228 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.17■□□□□ 0.5
SCML4Q8N228 MIR7706-201ENST00000613747 67 ntBASIC18.17■□□□□ 0.5
SCML4Q8N228 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SCML4Q8N228 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCML4Q8N228 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCML4Q8N228 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCML4Q8N228 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCML4Q8N228 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCML4Q8N228 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
SCML4Q8N228 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.16■□□□□ 0.5
SCML4Q8N228 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.16■□□□□ 0.5
SCML4Q8N228 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SCML4Q8N228 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
SCML4Q8N228 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 GPR89P-201ENST00000407924 1495 ntBASIC18.16■□□□□ 0.5
SCML4Q8N228 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 AC105339.3-201ENST00000560043 636 ntBASIC18.16■□□□□ 0.5
SCML4Q8N228 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.16■□□□□ 0.5
SCML4Q8N228 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.16■□□□□ 0.5
SCML4Q8N228 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.16■□□□□ 0.5
SCML4Q8N228 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.16■□□□□ 0.5
SCML4Q8N228 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCML4Q8N228 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SCML4Q8N228 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.15■□□□□ 0.5
SCML4Q8N228 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.15■□□□□ 0.5
SCML4Q8N228 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
SCML4Q8N228 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SCML4Q8N228 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.15■□□□□ 0.5
SCML4Q8N228 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.15■□□□□ 0.5
SCML4Q8N228 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.15■□□□□ 0.5
SCML4Q8N228 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.15■□□□□ 0.5
SCML4Q8N228 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SCML4Q8N228 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.15■□□□□ 0.5
SCML4Q8N228 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.15■□□□□ 0.5
SCML4Q8N228 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.15■□□□□ 0.5
SCML4Q8N228 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SCML4Q8N228 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.15■□□□□ 0.5
SCML4Q8N228 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SCML4Q8N228 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.15■□□□□ 0.5
SCML4Q8N228 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCML4Q8N228 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SCML4Q8N228 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SCML4Q8N228 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
SCML4Q8N228 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SCML4Q8N228 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.5
SCML4Q8N228 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SCML4Q8N228 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.14■□□□□ 0.49
SCML4Q8N228 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SCML4Q8N228 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCML4Q8N228 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCML4Q8N228 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCML4Q8N228 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SCML4Q8N228 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCML4Q8N228 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SCML4Q8N228 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.14■□□□□ 0.49
SCML4Q8N228 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SCML4Q8N228 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCML4Q8N228 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.14■□□□□ 0.49
SCML4Q8N228 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SCML4Q8N228 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.14■□□□□ 0.49
SCML4Q8N228 AC093909.1-201ENST00000504731 1122 ntBASIC18.14■□□□□ 0.49
SCML4Q8N228 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.14■□□□□ 0.49
SCML4Q8N228 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.14■□□□□ 0.49
SCML4Q8N228 AC012640.2-201ENST00000561606 901 ntBASIC18.14■□□□□ 0.49
SCML4Q8N228 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
SCML4Q8N228 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.14■□□□□ 0.49
SCML4Q8N228 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.14■□□□□ 0.49
SCML4Q8N228 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCML4Q8N228 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SCML4Q8N228 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCML4Q8N228 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCML4Q8N228 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms