Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 TSPY20P-201ENST00000450910 630 ntBASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 AC008550.1-201ENST00000511500 884 ntBASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 USP36-216ENST00000589424 970 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC01561Q8N1V8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 FAM87A-204ENST00000613235 858 ntBASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 AL031432.5-201ENST00000641059 760 ntBASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 PCDH8P1-201ENST00000428983 2773 ntBASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC01561Q8N1V8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC01561Q8N1V8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms