Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 NUS1P1-201ENST00000446295 882 ntBASIC16.45■□□□□ 0.22
CCDC71Q8IV32 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 TPSP2-201ENST00000561760 610 ntBASIC16.45■□□□□ 0.22
CCDC71Q8IV32 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 AC106886.4-201ENST00000623557 2502 ntBASIC16.45■□□□□ 0.22
CCDC71Q8IV32 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.45■□□□□ 0.22
CCDC71Q8IV32 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC71Q8IV32 KRT8P7-201ENST00000533003 1432 ntBASIC16.45■□□□□ 0.22
CCDC71Q8IV32 HOXB1-202ENST00000577092 1414 ntBASIC16.45■□□□□ 0.22
CCDC71Q8IV32 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 FDX1P1-201ENST00000449115 551 ntBASIC16.44■□□□□ 0.22
CCDC71Q8IV32 TOB2P1-201ENST00000469761 992 ntBASIC16.44■□□□□ 0.22
CCDC71Q8IV32 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 LINC00304-203ENST00000565008 1864 ntBASIC16.44■□□□□ 0.22
CCDC71Q8IV32 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC71Q8IV32 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 PCDHB19P-201ENST00000570871 2371 ntBASIC16.43■□□□□ 0.22
CCDC71Q8IV32 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 BCL2-203ENST00000589955 5011 ntBASIC16.43■□□□□ 0.22
CCDC71Q8IV32 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 DRAXINP1-201ENST00000437611 948 ntBASIC16.43■□□□□ 0.22
CCDC71Q8IV32 FAAHP1-202ENST00000446499 1238 ntBASIC16.43■□□□□ 0.22
CCDC71Q8IV32 EMBP1-201ENST00000458200 901 ntBASIC16.43■□□□□ 0.22
CCDC71Q8IV32 AP003733.1-201ENST00000491725 852 ntBASIC16.43■□□□□ 0.22
CCDC71Q8IV32 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 FOSL1P1-201ENST00000511041 816 ntBASIC16.43■□□□□ 0.22
CCDC71Q8IV32 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 AC005332.3-201ENST00000589904 676 ntBASIC16.43■□□□□ 0.22
CCDC71Q8IV32 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC71Q8IV32 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms