Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPS6Q86YV9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.33■□□□□ 0.37
HPS6Q86YV9 AC093010.1-201ENST00000473625 1624 ntBASIC17.33■□□□□ 0.37
HPS6Q86YV9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPS6Q86YV9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.33■□□□□ 0.36
HPS6Q86YV9 AC004870.1-201ENST00000315132 882 ntBASIC17.33■□□□□ 0.36
HPS6Q86YV9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS6Q86YV9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.33■□□□□ 0.36
HPS6Q86YV9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HPS6Q86YV9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HPS6Q86YV9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.33■□□□□ 0.36
HPS6Q86YV9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.33■□□□□ 0.36
HPS6Q86YV9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
HPS6Q86YV9 AC011498.5-201ENST00000592027 486 ntBASIC17.33■□□□□ 0.36
HPS6Q86YV9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HPS6Q86YV9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.33■□□□□ 0.36
HPS6Q86YV9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS6Q86YV9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS6Q86YV9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HPS6Q86YV9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HPS6Q86YV9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HPS6Q86YV9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS6Q86YV9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HPS6Q86YV9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.33■□□□□ 0.36
HPS6Q86YV9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HPS6Q86YV9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS6Q86YV9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPS6Q86YV9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 KRT8P50-201ENST00000562022 1438 ntBASIC17.32■□□□□ 0.36
HPS6Q86YV9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 SPDYE13P-201ENST00000445314 798 ntBASIC17.32■□□□□ 0.36
HPS6Q86YV9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 AC106886.4-201ENST00000623557 2502 ntBASIC17.32■□□□□ 0.36
HPS6Q86YV9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.32■□□□□ 0.36
HPS6Q86YV9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.32■□□□□ 0.36
HPS6Q86YV9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPS6Q86YV9 SDHAP2-201ENST00000455183 2001 ntBASIC17.31■□□□□ 0.36
HPS6Q86YV9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms