Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 REXO1L12P-201ENST00000622156 912 ntBASIC17.68■□□□□ 0.42
PACS2Q86VP3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PACS2Q86VP3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.68■□□□□ 0.42
PACS2Q86VP3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 MIR6786-201ENST00000616843 113 ntBASIC17.67■□□□□ 0.42
PACS2Q86VP3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 CICP4-201ENST00000447359 2812 ntBASIC17.67■□□□□ 0.42
PACS2Q86VP3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 MTMR9LP-203ENST00000426597 1545 ntBASIC17.67■□□□□ 0.42
PACS2Q86VP3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PACS2Q86VP3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PACS2Q86VP3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.66■□□□□ 0.42
PACS2Q86VP3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.66■□□□□ 0.42
PACS2Q86VP3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.66■□□□□ 0.42
PACS2Q86VP3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.66■□□□□ 0.42
PACS2Q86VP3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.66■□□□□ 0.42
PACS2Q86VP3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.66■□□□□ 0.42
PACS2Q86VP3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 BX088651.1-201ENST00000540551 451 ntBASIC17.66■□□□□ 0.42
PACS2Q86VP3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.66■□□□□ 0.42
PACS2Q86VP3 AC073912.3-201ENST00000624414 853 ntBASIC17.66■□□□□ 0.42
PACS2Q86VP3 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.66■□□□□ 0.42
PACS2Q86VP3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
PACS2Q86VP3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PACS2Q86VP3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.66■□□□□ 0.42
PACS2Q86VP3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.66■□□□□ 0.42
PACS2Q86VP3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PACS2Q86VP3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PACS2Q86VP3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PACS2Q86VP3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PACS2Q86VP3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.65■□□□□ 0.42
PACS2Q86VP3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PACS2Q86VP3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PACS2Q86VP3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PACS2Q86VP3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.65■□□□□ 0.42
PACS2Q86VP3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PACS2Q86VP3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PACS2Q86VP3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PACS2Q86VP3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PACS2Q86VP3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PACS2Q86VP3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PACS2Q86VP3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.65■□□□□ 0.42
PACS2Q86VP3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms