Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TUBA1AQ71U36 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TUBA1AQ71U36 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBA1AQ71U36 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TUBA1AQ71U36 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBA1AQ71U36 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
TUBA1AQ71U36 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBA1AQ71U36 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TUBA1AQ71U36 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBA1AQ71U36 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBA1AQ71U36 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.22■□□□□ 0.19
TUBA1AQ71U36 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 AC022616.7-201ENST00000525383 220 ntBASIC16.22■□□□□ 0.19
TUBA1AQ71U36 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 AC106886.4-201ENST00000623557 2502 ntBASIC16.22■□□□□ 0.19
TUBA1AQ71U36 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBA1AQ71U36 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 AL355312.1-201ENST00000407115 2176 ntBASIC16.21■□□□□ 0.19
TUBA1AQ71U36 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 AGGF1P2-201ENST00000426656 2106 ntBASIC16.21■□□□□ 0.19
TUBA1AQ71U36 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 AC092850.2-201ENST00000623821 2697 ntBASIC16.21■□□□□ 0.19
TUBA1AQ71U36 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 KRT18P38-201ENST00000449496 1282 ntBASIC16.21■□□□□ 0.19
TUBA1AQ71U36 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 SEC1P-202ENST00000473944 940 ntBASIC16.21■□□□□ 0.19
TUBA1AQ71U36 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 KRT18P41-201ENST00000518924 1277 ntBASIC16.21■□□□□ 0.19
TUBA1AQ71U36 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 NTF6B-201ENST00000591913 560 ntBASIC16.21■□□□□ 0.19
TUBA1AQ71U36 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA1AQ71U36 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TUBA1AQ71U36 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TUBA1AQ71U36 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TUBA1AQ71U36 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TUBA1AQ71U36 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TUBA1AQ71U36 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TUBA1AQ71U36 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TUBA1AQ71U36 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TUBA1AQ71U36 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms