Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 AC005332.1-201ENST00000577698 1310 ntBASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
LRFN4Q6PJG9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 AC087388.1-201ENST00000571370 1112 ntBASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 AC009949.1-201ENST00000623048 1830 ntBASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRFN4Q6PJG9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 RN7SL606P-201ENST00000472779 293 ntBASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.8■□□□□ 0.12
LRFN4Q6PJG9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms