Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 TSPY14P-201ENST00000303979 915 ntBASIC15.34■□□□□ 0.05
C11orf88Q6PI97 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 SLC25A3P1-201ENST00000443844 931 ntBASIC15.34■□□□□ 0.05
C11orf88Q6PI97 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 Z85996.1-201ENST00000494644 937 ntBASIC15.34■□□□□ 0.05
C11orf88Q6PI97 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 AC010947.1-201ENST00000623454 693 ntBASIC15.34■□□□□ 0.05
C11orf88Q6PI97 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 KRT8P3-201ENST00000519669 1449 ntBASIC15.34■□□□□ 0.05
C11orf88Q6PI97 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
C11orf88Q6PI97 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.33■□□□□ 0.05
C11orf88Q6PI97 AL357033.4-201ENST00000617703 1807 ntBASIC15.33■□□□□ 0.05
C11orf88Q6PI97 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.33■□□□□ 0.05
C11orf88Q6PI97 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
C11orf88Q6PI97 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
C11orf88Q6PI97 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
C11orf88Q6PI97 AC006116.8-202ENST00000587620 1550 ntBASIC15.33■□□□□ 0.05
C11orf88Q6PI97 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
C11orf88Q6PI97 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 AL162727.3-201ENST00000635661 2787 ntBASIC15.33■□□□□ 0.04
C11orf88Q6PI97 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 MESTP1-201ENST00000404287 994 ntBASIC15.33■□□□□ 0.04
C11orf88Q6PI97 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 AC004951.3-201ENST00000418645 1148 ntBASIC15.33■□□□□ 0.04
C11orf88Q6PI97 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 AC097488.1-201ENST00000507834 756 ntBASIC15.33■□□□□ 0.04
C11orf88Q6PI97 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 AP000692.2-201ENST00000608391 879 ntBASIC15.33■□□□□ 0.04
C11orf88Q6PI97 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 AC130371.2-201ENST00000619443 611 ntBASIC15.33■□□□□ 0.04
C11orf88Q6PI97 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.33■□□□□ 0.04
C11orf88Q6PI97 AC008741.2-201ENST00000612792 3115 ntBASIC15.32■□□□□ 0.04
C11orf88Q6PI97 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
C11orf88Q6PI97 AC005521.1-201ENST00000393351 872 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms