Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 AC012183.1-201ENST00000625197 499 ntBASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRPF38BQ5VTL8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 HLA-V-204ENST00000476601 1289 ntBASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 AC079328.1-201ENST00000560358 952 ntBASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRPF38BQ5VTL8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 ANKRD19P-201ENST00000338192 862 ntBASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 COX5BP2-201ENST00000392354 334 ntBASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 U62317.3-201ENST00000608319 855 ntBASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 AC092667.1-201ENST00000434301 2586 ntBASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRPF38BQ5VTL8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 GABARAPL3-202ENST00000624044 1851 ntBASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 SIRPAP1-201ENST00000448467 1770 ntBASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms