Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 AC074051.2-201ENST00000565115 352 ntBASIC19.94■□□□□ 0.78
LONRF3Q496Y0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LONRF3Q496Y0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 IFNL4P1-201ENST00000607083 540 ntBASIC19.93■□□□□ 0.78
LONRF3Q496Y0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.93■□□□□ 0.78
LONRF3Q496Y0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 LYSMD4-203ENST00000378904 2122 ntBASIC19.92■□□□□ 0.78
LONRF3Q496Y0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 EMBP1-201ENST00000458200 901 ntBASIC19.92■□□□□ 0.78
LONRF3Q496Y0 AC091607.1-201ENST00000490318 1060 ntBASIC19.92■□□□□ 0.78
LONRF3Q496Y0 AC090616.6-201ENST00000582640 721 ntBASIC19.92■□□□□ 0.78
LONRF3Q496Y0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 AL592071.1-201ENST00000611956 408 ntBASIC19.92■□□□□ 0.78
LONRF3Q496Y0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
LONRF3Q496Y0 BX276092.7-203ENST00000637198 1536 ntBASIC19.92■□□□□ 0.78
LONRF3Q496Y0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms