Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 AC148477.5-201ENST00000625164 1645 ntBASIC20.42■□□□□ 0.86
CCDC96Q2M329 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 OR6D1P-202ENST00000641007 5290 ntBASIC20.42■□□□□ 0.86
CCDC96Q2M329 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 AC003669.1-201ENST00000334569 611 ntBASIC20.42■□□□□ 0.86
CCDC96Q2M329 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 AC092910.1-201ENST00000482027 1129 ntBASIC20.42■□□□□ 0.86
CCDC96Q2M329 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 AC012640.2-201ENST00000561606 901 ntBASIC20.42■□□□□ 0.86
CCDC96Q2M329 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC96Q2M329 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC96Q2M329 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC96Q2M329 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC96Q2M329 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC96Q2M329 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC96Q2M329 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC96Q2M329 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC96Q2M329 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC96Q2M329 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC96Q2M329 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC96Q2M329 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC96Q2M329 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC96Q2M329 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC96Q2M329 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC96Q2M329 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC96Q2M329 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC96Q2M329 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.41■□□□□ 0.86
CCDC96Q2M329 AC008735.5-201ENST00000623544 497 ntBASIC20.41■□□□□ 0.86
CCDC96Q2M329 AC107918.4-202ENST00000641623 219 ntBASIC20.41■□□□□ 0.86
CCDC96Q2M329 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC96Q2M329 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC96Q2M329 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC96Q2M329 AL133373.2-201ENST00000623187 2828 ntBASIC20.41■□□□□ 0.86
CCDC96Q2M329 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC96Q2M329 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC96Q2M329 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC96Q2M329 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC96Q2M329 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC96Q2M329 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC96Q2M329 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 LAGE3P1-201ENST00000425356 484 ntBASIC20.4■□□□□ 0.86
CCDC96Q2M329 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 AC002558.1-201ENST00000488906 803 ntBASIC20.4■□□□□ 0.86
CCDC96Q2M329 STK19B-204ENST00000512515 211 ntBASIC20.4■□□□□ 0.86
CCDC96Q2M329 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC96Q2M329 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 AF228730.7-201ENST00000641842 219 ntBASIC20.4■□□□□ 0.86
CCDC96Q2M329 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CCDC96Q2M329 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms