Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 MIR3652-201ENST00000579335 131 ntBASIC18.7■□□□□ 0.58
GCNT1Q02742 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.7■□□□□ 0.58
GCNT1Q02742 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.7■□□□□ 0.58
GCNT1Q02742 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
GCNT1Q02742 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCNT1Q02742 AC138894.3-201ENST00000603787 634 ntBASIC18.7■□□□□ 0.58
GCNT1Q02742 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.7■□□□□ 0.58
GCNT1Q02742 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.7■□□□□ 0.58
GCNT1Q02742 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
GCNT1Q02742 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCNT1Q02742 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.7■□□□□ 0.58
GCNT1Q02742 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.7■□□□□ 0.58
GCNT1Q02742 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCNT1Q02742 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
GCNT1Q02742 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GCNT1Q02742 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.69■□□□□ 0.58
GCNT1Q02742 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GCNT1Q02742 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.69■□□□□ 0.58
GCNT1Q02742 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.69■□□□□ 0.58
GCNT1Q02742 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GCNT1Q02742 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.69■□□□□ 0.58
GCNT1Q02742 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.69■□□□□ 0.58
GCNT1Q02742 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.69■□□□□ 0.58
GCNT1Q02742 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.69■□□□□ 0.58
GCNT1Q02742 SLC25A1P3-201ENST00000395415 828 ntBASIC18.69■□□□□ 0.58
GCNT1Q02742 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.69■□□□□ 0.58
GCNT1Q02742 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.69■□□□□ 0.58
GCNT1Q02742 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.69■□□□□ 0.58
GCNT1Q02742 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 AL591684.3-201ENST00000605187 298 ntBASIC18.69■□□□□ 0.58
GCNT1Q02742 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.69■□□□□ 0.58
GCNT1Q02742 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GCNT1Q02742 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GCNT1Q02742 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
GCNT1Q02742 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCNT1Q02742 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.69■□□□□ 0.58
GCNT1Q02742 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.68■□□□□ 0.58
GCNT1Q02742 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GCNT1Q02742 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.68■□□□□ 0.58
GCNT1Q02742 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNT1Q02742 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GCNT1Q02742 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNT1Q02742 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GCNT1Q02742 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
GCNT1Q02742 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNT1Q02742 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.68■□□□□ 0.58
GCNT1Q02742 FOSL1P1-201ENST00000511041 816 ntBASIC18.68■□□□□ 0.58
GCNT1Q02742 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GCNT1Q02742 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.68■□□□□ 0.58
GCNT1Q02742 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.68■□□□□ 0.58
GCNT1Q02742 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.68■□□□□ 0.58
GCNT1Q02742 AC073592.4-201ENST00000623827 446 ntBASIC18.68■□□□□ 0.58
GCNT1Q02742 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.68■□□□□ 0.58
GCNT1Q02742 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GCNT1Q02742 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GCNT1Q02742 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
GCNT1Q02742 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.68■□□□□ 0.58
GCNT1Q02742 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GCNT1Q02742 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNT1Q02742 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.68■□□□□ 0.58
GCNT1Q02742 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GCNT1Q02742 FZD10-202ENST00000539839 3282 ntBASIC18.68■□□□□ 0.58
GCNT1Q02742 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
GCNT1Q02742 SIGLEC16-201ENST00000599858 1437 ntBASIC18.67■□□□□ 0.58
GCNT1Q02742 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
GCNT1Q02742 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.67■□□□□ 0.58
GCNT1Q02742 AC093525.9-201ENST00000624961 1746 ntBASIC18.67■□□□□ 0.58
GCNT1Q02742 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNT1Q02742 SPDYE21P-201ENST00000413323 827 ntBASIC18.67■□□□□ 0.58
GCNT1Q02742 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GCNT1Q02742 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.67■□□□□ 0.58
GCNT1Q02742 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.67■□□□□ 0.58
GCNT1Q02742 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.67■□□□□ 0.58
GCNT1Q02742 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.67■□□□□ 0.58
GCNT1Q02742 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
GCNT1Q02742 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.67■□□□□ 0.58
GCNT1Q02742 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.67■□□□□ 0.58
GCNT1Q02742 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.67■□□□□ 0.58
GCNT1Q02742 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms