Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK3Q00526 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK3Q00526 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK3Q00526 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDK3Q00526 AC097637.2-201ENST00000624096 1997 ntBASIC17.22■□□□□ 0.35
CDK3Q00526 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK3Q00526 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK3Q00526 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK3Q00526 AC046185.3-201ENST00000623228 1824 ntBASIC17.22■□□□□ 0.35
CDK3Q00526 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK3Q00526 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK3Q00526 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CDK3Q00526 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK3Q00526 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK3Q00526 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK3Q00526 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK3Q00526 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK3Q00526 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK3Q00526 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.22■□□□□ 0.35
CDK3Q00526 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK3Q00526 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK3Q00526 AF228730.7-201ENST00000641842 219 ntBASIC17.22■□□□□ 0.35
CDK3Q00526 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK3Q00526 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK3Q00526 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK3Q00526 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CDK3Q00526 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CDK3Q00526 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK3Q00526 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK3Q00526 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK3Q00526 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK3Q00526 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK3Q00526 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CDK3Q00526 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK3Q00526 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK3Q00526 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK3Q00526 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK3Q00526 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK3Q00526 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDK3Q00526 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK3Q00526 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDK3Q00526 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK3Q00526 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK3Q00526 AC133963.1-201ENST00000504166 1679 ntBASIC17.21■□□□□ 0.35
CDK3Q00526 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK3Q00526 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK3Q00526 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK3Q00526 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK3Q00526 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK3Q00526 AC073621.1-201ENST00000392730 636 ntBASIC17.21■□□□□ 0.35
CDK3Q00526 RPL13AP23-201ENST00000480739 586 ntBASIC17.21■□□□□ 0.35
CDK3Q00526 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.21■□□□□ 0.35
CDK3Q00526 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK3Q00526 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.21■□□□□ 0.35
CDK3Q00526 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.21■□□□□ 0.35
CDK3Q00526 AL356488.2-201ENST00000602755 427 ntBASIC17.21■□□□□ 0.35
CDK3Q00526 MIR1199-201ENST00000621445 119 ntBASIC17.21■□□□□ 0.35
CDK3Q00526 AC117500.6-201ENST00000624871 588 ntBASIC17.21■□□□□ 0.35
CDK3Q00526 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK3Q00526 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.21■□□□□ 0.35
CDK3Q00526 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDK3Q00526 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CDK3Q00526 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CDK3Q00526 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDK3Q00526 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.21■□□□□ 0.34
CDK3Q00526 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.21■□□□□ 0.34
CDK3Q00526 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CDK3Q00526 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK3Q00526 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK3Q00526 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK3Q00526 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CDK3Q00526 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK3Q00526 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 ELK2BP-201ENST00000415014 1224 ntBASIC17.2■□□□□ 0.34
CDK3Q00526 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK3Q00526 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK3Q00526 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK3Q00526 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.2■□□□□ 0.34
CDK3Q00526 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK3Q00526 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CDK3Q00526 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK3Q00526 AL139424.1-201ENST00000607572 797 ntBASIC17.2■□□□□ 0.34
CDK3Q00526 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CDK3Q00526 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK3Q00526 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CDK3Q00526 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK3Q00526 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
CDK3Q00526 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms