Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCNA1P78396 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.81■□□□□ 0.76
CCNA1P78396 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.81■□□□□ 0.76
CCNA1P78396 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA1P78396 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA1P78396 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA1P78396 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA1P78396 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CCNA1P78396 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA1P78396 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.81■□□□□ 0.76
CCNA1P78396 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCNA1P78396 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.81■□□□□ 0.76
CCNA1P78396 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCNA1P78396 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA1P78396 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNA1P78396 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA1P78396 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA1P78396 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNA1P78396 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA1P78396 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.81■□□□□ 0.76
CCNA1P78396 AP000997.3-201ENST00000623333 2250 ntBASIC19.81■□□□□ 0.76
CCNA1P78396 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCNA1P78396 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNA1P78396 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCNA1P78396 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.8■□□□□ 0.76
CCNA1P78396 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCNA1P78396 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA1P78396 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA1P78396 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.8■□□□□ 0.76
CCNA1P78396 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA1P78396 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNA1P78396 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCNA1P78396 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCNA1P78396 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNA1P78396 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.8■□□□□ 0.76
CCNA1P78396 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCNA1P78396 HLA-J-203ENST00000494367 1087 ntBASIC19.8■□□□□ 0.76
CCNA1P78396 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.8■□□□□ 0.76
CCNA1P78396 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.8■□□□□ 0.76
CCNA1P78396 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.8■□□□□ 0.76
CCNA1P78396 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCNA1P78396 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA1P78396 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCNA1P78396 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA1P78396 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA1P78396 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCNA1P78396 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.79■□□□□ 0.76
CCNA1P78396 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.79■□□□□ 0.76
CCNA1P78396 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCNA1P78396 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNA1P78396 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNA1P78396 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CCNA1P78396 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.79■□□□□ 0.76
CCNA1P78396 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNA1P78396 AC046185.3-201ENST00000623228 1824 ntBASIC19.79■□□□□ 0.76
CCNA1P78396 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.79■□□□□ 0.76
CCNA1P78396 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCNA1P78396 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CCNA1P78396 AC002056.1-201ENST00000395613 760 ntBASIC19.79■□□□□ 0.76
CCNA1P78396 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNA1P78396 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNA1P78396 AC023141.5-201ENST00000458585 616 ntBASIC19.79■□□□□ 0.76
CCNA1P78396 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.79■□□□□ 0.76
CCNA1P78396 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.79■□□□□ 0.76
CCNA1P78396 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.79■□□□□ 0.76
CCNA1P78396 SPCS2P1-201ENST00000561636 679 ntBASIC19.79■□□□□ 0.76
CCNA1P78396 AC022145.2-201ENST00000598203 171 ntBASIC19.79■□□□□ 0.76
CCNA1P78396 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCNA1P78396 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNA1P78396 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNA1P78396 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNA1P78396 AC138932.1-201ENST00000534164 6830 ntBASIC19.79■□□□□ 0.76
CCNA1P78396 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCNA1P78396 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.79■□□□□ 0.76
CCNA1P78396 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCNA1P78396 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.78■□□□□ 0.76
CCNA1P78396 AC006116.8-202ENST00000587620 1550 ntBASIC19.78■□□□□ 0.76
CCNA1P78396 AC129492.6-201ENST00000611383 1305 ntBASIC19.78■□□□□ 0.76
CCNA1P78396 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.78■□□□□ 0.76
CCNA1P78396 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNA1P78396 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNA1P78396 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.78■□□□□ 0.76
CCNA1P78396 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNA1P78396 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCNA1P78396 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCNA1P78396 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.78■□□□□ 0.76
CCNA1P78396 PAWRP1-201ENST00000451083 565 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms