Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPL39P62891 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
RPL39P62891 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.42□□□□□ -0.42
RPL39P62891 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.42□□□□□ -0.42
RPL39P62891 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RPL39P62891 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.42□□□□□ -0.42
RPL39P62891 PCDHA1-201ENST00000378133 2726 ntBASIC12.42□□□□□ -0.42
RPL39P62891 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.42□□□□□ -0.42
RPL39P62891 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.42□□□□□ -0.42
RPL39P62891 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RPL39P62891 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.42□□□□□ -0.42
RPL39P62891 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.42□□□□□ -0.42
RPL39P62891 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.42□□□□□ -0.42
RPL39P62891 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12.42□□□□□ -0.42
RPL39P62891 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.42□□□□□ -0.42
RPL39P62891 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.42□□□□□ -0.42
RPL39P62891 WWOX-216ENST00000569818 525 ntBASIC12.42□□□□□ -0.42
RPL39P62891 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.42□□□□□ -0.42
RPL39P62891 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.42□□□□□ -0.42
RPL39P62891 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RPL39P62891 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
RPL39P62891 AC010240.3-201ENST00000607688 395 ntBASIC12.42□□□□□ -0.42
RPL39P62891 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.42□□□□□ -0.42
RPL39P62891 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.42□□□□□ -0.42
RPL39P62891 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
RPL39P62891 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.42□□□□□ -0.42
RPL39P62891 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.42□□□□□ -0.42
RPL39P62891 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.42□□□□□ -0.42
RPL39P62891 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPL39P62891 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
RPL39P62891 LYSMD4-203ENST00000378904 2122 ntBASIC12.41□□□□□ -0.42
RPL39P62891 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.41□□□□□ -0.42
RPL39P62891 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RPL39P62891 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.41□□□□□ -0.42
RPL39P62891 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPL39P62891 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RPL39P62891 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.41□□□□□ -0.42
RPL39P62891 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.41□□□□□ -0.42
RPL39P62891 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
RPL39P62891 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.41□□□□□ -0.42
RPL39P62891 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.41□□□□□ -0.42
RPL39P62891 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.41□□□□□ -0.42
RPL39P62891 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPL39P62891 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPL39P62891 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RPL39P62891 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPL39P62891 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.41□□□□□ -0.42
RPL39P62891 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPL39P62891 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.41□□□□□ -0.42
RPL39P62891 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RPL39P62891 AC116562.2-201ENST00000507042 360 ntBASIC12.41□□□□□ -0.42
RPL39P62891 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.41□□□□□ -0.42
RPL39P62891 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.41□□□□□ -0.42
RPL39P62891 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.41□□□□□ -0.42
RPL39P62891 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPL39P62891 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.41□□□□□ -0.42
RPL39P62891 AC016396.2-201ENST00000562575 1417 ntBASIC12.41□□□□□ -0.42
RPL39P62891 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
RPL39P62891 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.41□□□□□ -0.42
RPL39P62891 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RPL39P62891 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
RPL39P62891 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.41□□□□□ -0.42
RPL39P62891 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.41□□□□□ -0.42
RPL39P62891 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RPL39P62891 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RPL39P62891 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPL39P62891 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RPL39P62891 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RPL39P62891 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
RPL39P62891 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RPL39P62891 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms