Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
USP46P62068 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.43■□□□□ 0.54
USP46P62068 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.43■□□□□ 0.54
USP46P62068 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.43■□□□□ 0.54
USP46P62068 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.43■□□□□ 0.54
USP46P62068 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.43■□□□□ 0.54
USP46P62068 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.43■□□□□ 0.54
USP46P62068 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
USP46P62068 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
USP46P62068 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 REXO1L11P-201ENST00000620964 1927 ntBASIC18.43■□□□□ 0.54
USP46P62068 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
USP46P62068 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
USP46P62068 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP46P62068 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP46P62068 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP46P62068 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.42■□□□□ 0.54
USP46P62068 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
USP46P62068 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP46P62068 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
USP46P62068 AP002414.3-201ENST00000589352 1468 ntBASIC18.42■□□□□ 0.54
USP46P62068 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP46P62068 RPS2P28-201ENST00000314255 741 ntBASIC18.42■□□□□ 0.54
USP46P62068 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP46P62068 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP46P62068 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.42■□□□□ 0.54
USP46P62068 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP46P62068 AL020989.1-201ENST00000422979 469 ntBASIC18.42■□□□□ 0.54
USP46P62068 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
USP46P62068 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.42■□□□□ 0.54
USP46P62068 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.42■□□□□ 0.54
USP46P62068 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
USP46P62068 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.42■□□□□ 0.54
USP46P62068 AC092910.1-201ENST00000482027 1129 ntBASIC18.42■□□□□ 0.54
USP46P62068 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.42■□□□□ 0.54
USP46P62068 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.42■□□□□ 0.54
USP46P62068 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.42■□□□□ 0.54
USP46P62068 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.42■□□□□ 0.54
USP46P62068 STK25P1-201ENST00000585406 838 ntBASIC18.42■□□□□ 0.54
USP46P62068 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.42■□□□□ 0.54
USP46P62068 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.42■□□□□ 0.54
USP46P62068 AC008735.5-201ENST00000623544 497 ntBASIC18.42■□□□□ 0.54
USP46P62068 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP46P62068 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
USP46P62068 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP46P62068 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP46P62068 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
USP46P62068 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.42■□□□□ 0.54
USP46P62068 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
USP46P62068 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.42■□□□□ 0.54
USP46P62068 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP46P62068 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
USP46P62068 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP46P62068 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
USP46P62068 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
USP46P62068 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.42■□□□□ 0.54
USP46P62068 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
USP46P62068 HLA-J-201ENST00000462773 1622 ntBASIC18.41■□□□□ 0.54
USP46P62068 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.41■□□□□ 0.54
USP46P62068 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP46P62068 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
USP46P62068 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP46P62068 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP46P62068 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP46P62068 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP46P62068 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP46P62068 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.41■□□□□ 0.54
USP46P62068 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.41■□□□□ 0.54
USP46P62068 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP46P62068 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP46P62068 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.41■□□□□ 0.54
USP46P62068 KLF4P1-201ENST00000412782 1185 ntBASIC18.41■□□□□ 0.54
USP46P62068 PRYP5-201ENST00000451909 266 ntBASIC18.41■□□□□ 0.54
USP46P62068 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.41■□□□□ 0.54
USP46P62068 RPL13AP23-201ENST00000480739 586 ntBASIC18.41■□□□□ 0.54
USP46P62068 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.41■□□□□ 0.54
USP46P62068 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP46P62068 IGHV3-22-201ENST00000520721 359 ntBASIC18.41■□□□□ 0.54
USP46P62068 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.41■□□□□ 0.54
USP46P62068 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.41■□□□□ 0.54
USP46P62068 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
USP46P62068 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP46P62068 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP46P62068 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.41■□□□□ 0.54
USP46P62068 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP46P62068 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP46P62068 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.41■□□□□ 0.54
USP46P62068 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms