Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.4■□□□□ 0.06
SEC61A1P61619 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.4■□□□□ 0.06
SEC61A1P61619 AC104390.1-201ENST00000555663 520 ntBASIC15.4■□□□□ 0.06
SEC61A1P61619 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.4■□□□□ 0.06
SEC61A1P61619 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 AC116407.4-201ENST00000623319 1061 ntBASIC15.4■□□□□ 0.06
SEC61A1P61619 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.4■□□□□ 0.06
SEC61A1P61619 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.4■□□□□ 0.06
SEC61A1P61619 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SEC61A1P61619 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.4■□□□□ 0.06
SEC61A1P61619 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SEC61A1P61619 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SEC61A1P61619 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.4■□□□□ 0.06
SEC61A1P61619 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.4■□□□□ 0.06
SEC61A1P61619 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SEC61A1P61619 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SEC61A1P61619 AL596257.1-201ENST00000641463 2694 ntBASIC15.4■□□□□ 0.06
SEC61A1P61619 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
SEC61A1P61619 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SEC61A1P61619 AL513477.1-201ENST00000602865 2407 ntBASIC15.39■□□□□ 0.05
SEC61A1P61619 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
SEC61A1P61619 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 AL356309.3-201ENST00000624132 1934 ntBASIC15.39■□□□□ 0.05
SEC61A1P61619 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 NFIC-211ENST00000641145 8399 ntBASIC15.39■□□□□ 0.05
SEC61A1P61619 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
SEC61A1P61619 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SEC61A1P61619 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SEC61A1P61619 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.39■□□□□ 0.05
SEC61A1P61619 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.39■□□□□ 0.05
SEC61A1P61619 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
SEC61A1P61619 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.39■□□□□ 0.05
SEC61A1P61619 AC093458.2-201ENST00000623150 629 ntBASIC15.39■□□□□ 0.05
SEC61A1P61619 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.39■□□□□ 0.05
SEC61A1P61619 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SEC61A1P61619 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.39■□□□□ 0.05
SEC61A1P61619 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SEC61A1P61619 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.39■□□□□ 0.05
SEC61A1P61619 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SEC61A1P61619 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.39■□□□□ 0.05
SEC61A1P61619 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SEC61A1P61619 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.39■□□□□ 0.05
SEC61A1P61619 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SEC61A1P61619 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SEC61A1P61619 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.38■□□□□ 0.05
SEC61A1P61619 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SEC61A1P61619 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
SEC61A1P61619 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SEC61A1P61619 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
SEC61A1P61619 KRT8P7-201ENST00000533003 1432 ntBASIC15.38■□□□□ 0.05
SEC61A1P61619 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.38■□□□□ 0.05
SEC61A1P61619 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.38■□□□□ 0.05
SEC61A1P61619 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.38■□□□□ 0.05
SEC61A1P61619 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.38■□□□□ 0.05
SEC61A1P61619 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SEC61A1P61619 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.38■□□□□ 0.05
SEC61A1P61619 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.38■□□□□ 0.05
SEC61A1P61619 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.38■□□□□ 0.05
SEC61A1P61619 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.38■□□□□ 0.05
SEC61A1P61619 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.38■□□□□ 0.05
SEC61A1P61619 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SEC61A1P61619 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms