Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 TERF1P1-201ENST00000311003 1181 ntBASIC16.35■□□□□ 0.21
CDH12P55289 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 SPDYE15P-201ENST00000424157 909 ntBASIC16.35■□□□□ 0.21
CDH12P55289 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH12P55289 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH12P55289 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CDH12P55289 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CDH12P55289 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
CDH12P55289 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 FER1L4-210ENST00000615531 5998 ntBASIC16.35■□□□□ 0.21
CDH12P55289 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH12P55289 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH12P55289 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH12P55289 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CDH12P55289 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CDH12P55289 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH12P55289 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDH12P55289 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CDH12P55289 STARP1-201ENST00000397973 869 ntBASIC16.34■□□□□ 0.21
CDH12P55289 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH12P55289 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CDH12P55289 KRT18P65-201ENST00000439811 1286 ntBASIC16.34■□□□□ 0.21
CDH12P55289 BX664615.1-201ENST00000443558 458 ntBASIC16.34■□□□□ 0.21
CDH12P55289 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.34■□□□□ 0.21
CDH12P55289 YBX1P2-201ENST00000489612 999 ntBASIC16.34■□□□□ 0.21
CDH12P55289 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH12P55289 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH12P55289 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH12P55289 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CDH12P55289 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH12P55289 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDH12P55289 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH12P55289 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH12P55289 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDH12P55289 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH12P55289 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
CDH12P55289 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH12P55289 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CDH12P55289 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.33■□□□□ 0.21
CDH12P55289 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH12P55289 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH12P55289 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CDH12P55289 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
CDH12P55289 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH12P55289 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
CDH12P55289 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 HLA-F-220ENST00000434407 884 ntBASIC16.33■□□□□ 0.2
CDH12P55289 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH12P55289 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CDH12P55289 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH12P55289 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH12P55289 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH12P55289 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CDH12P55289 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDH12P55289 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDH12P55289 AC073508.3-201ENST00000619697 1419 ntBASIC16.33■□□□□ 0.2
CDH12P55289 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CDH12P55289 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH12P55289 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms