Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.18■□□□□ 0.66
ACLYP53396 SPDYE10P-202ENST00000612005 668 ntBASIC19.18■□□□□ 0.66
ACLYP53396 SPDYE8P-202ENST00000612377 668 ntBASIC19.18■□□□□ 0.66
ACLYP53396 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.18■□□□□ 0.66
ACLYP53396 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACLYP53396 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
ACLYP53396 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.18■□□□□ 0.66
ACLYP53396 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ACLYP53396 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ACLYP53396 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACLYP53396 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ACLYP53396 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.18■□□□□ 0.66
ACLYP53396 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.17■□□□□ 0.66
ACLYP53396 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.17■□□□□ 0.66
ACLYP53396 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 AL135999.2-201ENST00000622438 1686 ntBASIC19.17■□□□□ 0.66
ACLYP53396 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.17■□□□□ 0.66
ACLYP53396 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
ACLYP53396 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.17■□□□□ 0.66
ACLYP53396 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.17■□□□□ 0.66
ACLYP53396 AC087163.2-201ENST00000457299 853 ntBASIC19.17■□□□□ 0.66
ACLYP53396 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.17■□□□□ 0.66
ACLYP53396 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.17■□□□□ 0.66
ACLYP53396 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.17■□□□□ 0.66
ACLYP53396 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.17■□□□□ 0.66
ACLYP53396 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.17■□□□□ 0.66
ACLYP53396 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.17■□□□□ 0.66
ACLYP53396 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.17■□□□□ 0.66
ACLYP53396 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.17■□□□□ 0.66
ACLYP53396 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACLYP53396 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.16■□□□□ 0.66
ACLYP53396 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.16■□□□□ 0.66
ACLYP53396 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.16■□□□□ 0.66
ACLYP53396 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.16■□□□□ 0.66
ACLYP53396 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
ACLYP53396 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.16■□□□□ 0.66
ACLYP53396 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ACLYP53396 AP000997.3-201ENST00000623333 2250 ntBASIC19.16■□□□□ 0.66
ACLYP53396 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ACLYP53396 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ACLYP53396 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
ACLYP53396 PMS2P4-201ENST00000412466 1052 ntBASIC19.16■□□□□ 0.66
ACLYP53396 AC140658.5-201ENST00000438532 169 ntBASIC19.16■□□□□ 0.66
ACLYP53396 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.16■□□□□ 0.66
ACLYP53396 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ACLYP53396 AC190387.1-201ENST00000551683 408 ntBASIC19.16■□□□□ 0.66
ACLYP53396 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.16■□□□□ 0.66
ACLYP53396 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.16■□□□□ 0.66
ACLYP53396 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.16■□□□□ 0.66
ACLYP53396 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.16■□□□□ 0.66
ACLYP53396 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ACLYP53396 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ACLYP53396 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACLYP53396 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.16■□□□□ 0.66
ACLYP53396 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.16■□□□□ 0.66
ACLYP53396 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.16■□□□□ 0.66
ACLYP53396 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.16■□□□□ 0.66
ACLYP53396 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ACLYP53396 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
ACLYP53396 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ACLYP53396 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ACLYP53396 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ACLYP53396 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
ACLYP53396 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ACLYP53396 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ACLYP53396 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACLYP53396 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.15■□□□□ 0.66
ACLYP53396 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ACLYP53396 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.15■□□□□ 0.66
ACLYP53396 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms