Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HMGA2P52926 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16■□□□□ 0.15
HMGA2P52926 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGA2P52926 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGA2P52926 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGA2P52926 STARP1-201ENST00000397973 869 ntBASIC16■□□□□ 0.15
HMGA2P52926 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGA2P52926 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16■□□□□ 0.15
HMGA2P52926 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16■□□□□ 0.15
HMGA2P52926 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HMGA2P52926 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
HMGA2P52926 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
HMGA2P52926 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HMGA2P52926 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16■□□□□ 0.15
HMGA2P52926 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16■□□□□ 0.15
HMGA2P52926 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HMGA2P52926 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.99■□□□□ 0.15
HMGA2P52926 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGA2P52926 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.99■□□□□ 0.15
HMGA2P52926 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.99■□□□□ 0.15
HMGA2P52926 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
HMGA2P52926 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
HMGA2P52926 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HMGA2P52926 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 FAM8A6P-201ENST00000407496 1135 ntBASIC15.99■□□□□ 0.15
HMGA2P52926 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGA2P52926 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.99■□□□□ 0.15
HMGA2P52926 AP003733.1-201ENST00000491725 852 ntBASIC15.99■□□□□ 0.15
HMGA2P52926 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HMGA2P52926 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGA2P52926 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 AL023973.1-201ENST00000624619 620 ntBASIC15.99■□□□□ 0.15
HMGA2P52926 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGA2P52926 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HMGA2P52926 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGA2P52926 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
HMGA2P52926 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGA2P52926 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGA2P52926 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGA2P52926 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGA2P52926 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HMGA2P52926 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HMGA2P52926 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGA2P52926 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGA2P52926 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGA2P52926 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGA2P52926 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HMGA2P52926 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.98■□□□□ 0.15
HMGA2P52926 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
HMGA2P52926 AC019129.2-201ENST00000609837 1235 ntBASIC15.98■□□□□ 0.15
HMGA2P52926 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.98■□□□□ 0.15
HMGA2P52926 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HMGA2P52926 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGA2P52926 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HMGA2P52926 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HMGA2P52926 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.97■□□□□ 0.15
HMGA2P52926 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
HMGA2P52926 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HMGA2P52926 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.97■□□□□ 0.15
HMGA2P52926 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HMGA2P52926 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HMGA2P52926 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HMGA2P52926 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HMGA2P52926 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms