Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.78■□□□□ 0.76
USP11P51784 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP11P51784 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP11P51784 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP11P51784 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP11P51784 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP11P51784 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP11P51784 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP11P51784 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP11P51784 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP11P51784 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
USP11P51784 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.78■□□□□ 0.76
USP11P51784 AC026396.1-201ENST00000419388 421 ntBASIC19.78■□□□□ 0.76
USP11P51784 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.78■□□□□ 0.76
USP11P51784 AC009078.2-202ENST00000463353 338 ntBASIC19.78■□□□□ 0.76
USP11P51784 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
USP11P51784 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.78■□□□□ 0.76
USP11P51784 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.78■□□□□ 0.76
USP11P51784 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
USP11P51784 SLC25A6P4-201ENST00000586535 553 ntBASIC19.78■□□□□ 0.76
USP11P51784 AL589182.2-201ENST00000619332 1049 ntBASIC19.78■□□□□ 0.76
USP11P51784 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
USP11P51784 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP11P51784 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.78■□□□□ 0.76
USP11P51784 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.78■□□□□ 0.76
USP11P51784 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
USP11P51784 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
USP11P51784 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP11P51784 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
USP11P51784 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP11P51784 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.77■□□□□ 0.76
USP11P51784 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
USP11P51784 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP11P51784 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP11P51784 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP11P51784 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP11P51784 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.77■□□□□ 0.76
USP11P51784 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.77■□□□□ 0.76
USP11P51784 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.77■□□□□ 0.76
USP11P51784 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.77■□□□□ 0.76
USP11P51784 MRPL3P1-201ENST00000400109 1033 ntBASIC19.77■□□□□ 0.76
USP11P51784 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.77■□□□□ 0.76
USP11P51784 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.77■□□□□ 0.76
USP11P51784 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.77■□□□□ 0.76
USP11P51784 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.77■□□□□ 0.76
USP11P51784 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.77■□□□□ 0.76
USP11P51784 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP11P51784 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
USP11P51784 AL135999.2-201ENST00000622438 1686 ntBASIC19.77■□□□□ 0.76
USP11P51784 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP11P51784 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.77■□□□□ 0.76
USP11P51784 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP11P51784 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
USP11P51784 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP11P51784 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
USP11P51784 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP11P51784 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP11P51784 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
USP11P51784 AC016396.2-201ENST00000562575 1417 ntBASIC19.76■□□□□ 0.75
USP11P51784 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.76■□□□□ 0.75
USP11P51784 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.76■□□□□ 0.75
USP11P51784 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP11P51784 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP11P51784 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.76■□□□□ 0.75
USP11P51784 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP11P51784 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
USP11P51784 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP11P51784 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP11P51784 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.76■□□□□ 0.75
USP11P51784 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP11P51784 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
USP11P51784 HNRNPDP1-201ENST00000439535 754 ntBASIC19.76■□□□□ 0.75
USP11P51784 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.76■□□□□ 0.75
USP11P51784 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.76■□□□□ 0.75
USP11P51784 AL773604.1-201ENST00000617417 272 ntBASIC19.76■□□□□ 0.75
USP11P51784 AC148477.8-201ENST00000624298 468 ntBASIC19.76■□□□□ 0.75
USP11P51784 AC107918.4-202ENST00000641623 219 ntBASIC19.76■□□□□ 0.75
USP11P51784 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
USP11P51784 BCL2-203ENST00000589955 5011 ntBASIC19.76■□□□□ 0.75
USP11P51784 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
USP11P51784 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.76■□□□□ 0.75
USP11P51784 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP11P51784 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP11P51784 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP11P51784 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.75■□□□□ 0.75
USP11P51784 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP11P51784 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP11P51784 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
USP11P51784 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP11P51784 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.75■□□□□ 0.75
USP11P51784 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.75■□□□□ 0.75
USP11P51784 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
USP11P51784 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP11P51784 RPS2P28-201ENST00000314255 741 ntBASIC19.75■□□□□ 0.75
USP11P51784 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP11P51784 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP11P51784 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.75■□□□□ 0.75
USP11P51784 ACTG1P4-201ENST00000425123 1122 ntBASIC19.75■□□□□ 0.75
USP11P51784 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP11P51784 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms