Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC30.99■■■□□ 2.55
SMARCA4P51532 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC30.99■■■□□ 2.55
SMARCA4P51532 CALY-202ENST00000368555 783 ntTSL 2 BASIC30.98■■■□□ 2.55
SMARCA4P51532 EDF1-203ENST00000371649 790 ntTSL 2 BASIC30.98■■■□□ 2.55
SMARCA4P51532 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SMARCA4P51532 TSSK5P-201ENST00000423978 907 ntBASIC30.98■■■□□ 2.55
SMARCA4P51532 AC097493.3-201ENST00000509725 367 ntBASIC30.98■■■□□ 2.55
SMARCA4P51532 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC30.98■■■□□ 2.55
SMARCA4P51532 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC30.98■■■□□ 2.55
SMARCA4P51532 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
SMARCA4P51532 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SMARCA4P51532 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SMARCA4P51532 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SMARCA4P51532 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC30.98■■■□□ 2.55
SMARCA4P51532 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC30.98■■■□□ 2.55
SMARCA4P51532 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC30.98■■■□□ 2.55
SMARCA4P51532 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC30.98■■■□□ 2.55
SMARCA4P51532 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC30.98■■■□□ 2.55
SMARCA4P51532 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
SMARCA4P51532 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SMARCA4P51532 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC30.97■■■□□ 2.55
SMARCA4P51532 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SMARCA4P51532 KRT18P55-202ENST00000578578 1546 ntBASIC30.97■■■□□ 2.55
SMARCA4P51532 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
SMARCA4P51532 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SMARCA4P51532 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SMARCA4P51532 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC30.97■■■□□ 2.55
SMARCA4P51532 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC30.97■■■□□ 2.55
SMARCA4P51532 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC30.97■■■□□ 2.55
SMARCA4P51532 AC005412.3-201ENST00000580309 715 ntBASIC30.97■■■□□ 2.55
SMARCA4P51532 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC30.97■■■□□ 2.55
SMARCA4P51532 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC30.97■■■□□ 2.55
SMARCA4P51532 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC30.96■■■□□ 2.55
SMARCA4P51532 OR8S1-201ENST00000310194 1080 ntBASIC30.96■■■□□ 2.55
SMARCA4P51532 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
SMARCA4P51532 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC30.96■■■□□ 2.55
SMARCA4P51532 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC30.96■■■□□ 2.55
SMARCA4P51532 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
SMARCA4P51532 ALG1L8P-201ENST00000533887 760 ntBASIC30.96■■■□□ 2.55
SMARCA4P51532 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
SMARCA4P51532 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SMARCA4P51532 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC30.96■■■□□ 2.55
SMARCA4P51532 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
SMARCA4P51532 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SMARCA4P51532 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SMARCA4P51532 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SMARCA4P51532 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SMARCA4P51532 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SMARCA4P51532 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC30.95■■■□□ 2.55
SMARCA4P51532 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SMARCA4P51532 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC30.95■■■□□ 2.55
SMARCA4P51532 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SMARCA4P51532 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
SMARCA4P51532 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
SMARCA4P51532 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC30.95■■■□□ 2.55
SMARCA4P51532 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC30.95■■■□□ 2.55
SMARCA4P51532 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
SMARCA4P51532 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
SMARCA4P51532 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
SMARCA4P51532 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC30.95■■■□□ 2.54
SMARCA4P51532 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC30.95■■■□□ 2.54
SMARCA4P51532 MIR3909-201ENST00000579518 119 ntBASIC30.95■■■□□ 2.54
SMARCA4P51532 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SMARCA4P51532 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SMARCA4P51532 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC30.94■■■□□ 2.54
SMARCA4P51532 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SMARCA4P51532 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SMARCA4P51532 WASH6P-202ENST00000359512 1437 ntBASIC30.94■■■□□ 2.54
SMARCA4P51532 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SMARCA4P51532 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SMARCA4P51532 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
SMARCA4P51532 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SMARCA4P51532 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SMARCA4P51532 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC30.94■■■□□ 2.54
SMARCA4P51532 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
SMARCA4P51532 AP000842.3-202ENST00000569238 1080 ntBASIC30.94■■■□□ 2.54
SMARCA4P51532 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC30.94■■■□□ 2.54
SMARCA4P51532 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SMARCA4P51532 SRP9-204ENST00000619790 377 ntTSL 2 BASIC30.94■■■□□ 2.54
SMARCA4P51532 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC30.94■■■□□ 2.54
SMARCA4P51532 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC30.94■■■□□ 2.54
SMARCA4P51532 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC30.94■■■□□ 2.54
SMARCA4P51532 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SMARCA4P51532 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SMARCA4P51532 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC30.93■■■□□ 2.54
SMARCA4P51532 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
SMARCA4P51532 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SMARCA4P51532 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SMARCA4P51532 UXT-AS1-201ENST00000590504 1525 ntBASIC30.93■■■□□ 2.54
SMARCA4P51532 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
SMARCA4P51532 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC30.93■■■□□ 2.54
SMARCA4P51532 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC30.93■■■□□ 2.54
SMARCA4P51532 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC30.93■■■□□ 2.54
SMARCA4P51532 TMPRSS11CP-201ENST00000453277 683 ntBASIC30.93■■■□□ 2.54
SMARCA4P51532 RN7SL692P-201ENST00000464677 288 ntBASIC30.93■■■□□ 2.54
SMARCA4P51532 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC30.93■■■□□ 2.54
SMARCA4P51532 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
SMARCA4P51532 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC30.93■■■□□ 2.54
SMARCA4P51532 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SMARCA4P51532 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms