Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC34P49427 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC34P49427 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
CDC34P49427 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CDC34P49427 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CDC34P49427 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC34P49427 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.89□□□□□ -0.19
CDC34P49427 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CDC34P49427 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CDC34P49427 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDC34P49427 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CDC34P49427 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CDC34P49427 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CDC34P49427 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 PCDHA1-201ENST00000378133 2726 ntBASIC13.88□□□□□ -0.19
CDC34P49427 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CDC34P49427 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC34P49427 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC34P49427 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CDC34P49427 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.88□□□□□ -0.19
CDC34P49427 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.88□□□□□ -0.19
CDC34P49427 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.88□□□□□ -0.19
CDC34P49427 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CDC34P49427 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC34P49427 AC133681.1-201ENST00000465482 601 ntBASIC13.88□□□□□ -0.19
CDC34P49427 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.88□□□□□ -0.19
CDC34P49427 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.88□□□□□ -0.19
CDC34P49427 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDC34P49427 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CDC34P49427 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC34P49427 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDC34P49427 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.88□□□□□ -0.19
CDC34P49427 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CDC34P49427 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDC34P49427 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CDC34P49427 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDC34P49427 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.87□□□□□ -0.19
CDC34P49427 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC34P49427 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC34P49427 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 AC096733.2-201ENST00000609937 1394 ntBASIC13.87□□□□□ -0.19
CDC34P49427 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC34P49427 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CDC34P49427 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.87□□□□□ -0.19
CDC34P49427 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.87□□□□□ -0.19
CDC34P49427 DDX43P3-201ENST00000441064 443 ntBASIC13.87□□□□□ -0.19
CDC34P49427 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CDC34P49427 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.87□□□□□ -0.19
CDC34P49427 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.87□□□□□ -0.19
CDC34P49427 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDC34P49427 MIR3180-4-201ENST00000582223 153 ntBASIC13.87□□□□□ -0.19
CDC34P49427 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.87□□□□□ -0.19
CDC34P49427 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC34P49427 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CDC34P49427 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC34P49427 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.87□□□□□ -0.19
CDC34P49427 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.87□□□□□ -0.19
CDC34P49427 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDC34P49427 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms