Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6CP48668 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
KRT6CP48668 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
KRT6CP48668 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.02■□□□□ 0.32
KRT6CP48668 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6CP48668 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT6CP48668 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6CP48668 AC097374.2-201ENST00000618617 1306 ntBASIC17.02■□□□□ 0.32
KRT6CP48668 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
KRT6CP48668 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
KRT6CP48668 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT6CP48668 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT6CP48668 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6CP48668 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6CP48668 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6CP48668 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6CP48668 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT6CP48668 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6CP48668 AC104076.2-201ENST00000448912 469 ntBASIC17.02■□□□□ 0.32
KRT6CP48668 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6CP48668 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.02■□□□□ 0.32
KRT6CP48668 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT6CP48668 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.02■□□□□ 0.32
KRT6CP48668 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6CP48668 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.02■□□□□ 0.32
KRT6CP48668 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
KRT6CP48668 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT6CP48668 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT6CP48668 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT6CP48668 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT6CP48668 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT6CP48668 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
KRT6CP48668 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.02■□□□□ 0.31
KRT6CP48668 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT6CP48668 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
KRT6CP48668 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
KRT6CP48668 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
KRT6CP48668 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT6CP48668 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
KRT6CP48668 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
KRT6CP48668 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT6CP48668 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT6CP48668 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
KRT6CP48668 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
KRT6CP48668 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT6CP48668 LYSMD4-203ENST00000378904 2122 ntBASIC17.01■□□□□ 0.31
KRT6CP48668 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT6CP48668 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT6CP48668 GUSBP12-201ENST00000513727 720 ntBASIC17.01■□□□□ 0.31
KRT6CP48668 AC022616.7-201ENST00000525383 220 ntBASIC17.01■□□□□ 0.31
KRT6CP48668 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.01■□□□□ 0.31
KRT6CP48668 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT6CP48668 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.01■□□□□ 0.31
KRT6CP48668 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.01■□□□□ 0.31
KRT6CP48668 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT6CP48668 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
KRT6CP48668 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
KRT6CP48668 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6CP48668 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT6CP48668 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
KRT6CP48668 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
KRT6CP48668 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17■□□□□ 0.31
KRT6CP48668 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT6CP48668 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
KRT6CP48668 PC-208ENST00000529047 1607 ntTSL 3 BASIC17■□□□□ 0.31
KRT6CP48668 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT6CP48668 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT6CP48668 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT6CP48668 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
KRT6CP48668 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17■□□□□ 0.31
KRT6CP48668 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17■□□□□ 0.31
KRT6CP48668 AL671277.2-201ENST00000458060 996 ntBASIC17■□□□□ 0.31
KRT6CP48668 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17■□□□□ 0.31
KRT6CP48668 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
KRT6CP48668 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT6CP48668 AC083849.1-201ENST00000615227 514 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms