Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CBX5P45973 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.15■□□□□ 0.02
CBX5P45973 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CBX5P45973 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CBX5P45973 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CBX5P45973 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.15■□□□□ 0.02
CBX5P45973 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.14■□□□□ 0.01
CBX5P45973 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.14■□□□□ 0.01
CBX5P45973 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.14■□□□□ 0.01
CBX5P45973 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.14■□□□□ 0.01
CBX5P45973 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CBX5P45973 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.14■□□□□ 0.01
CBX5P45973 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.14■□□□□ 0.01
CBX5P45973 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.14■□□□□ 0.01
CBX5P45973 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.14■□□□□ 0.01
CBX5P45973 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.14■□□□□ 0.01
CBX5P45973 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.14■□□□□ 0.01
CBX5P45973 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.14■□□□□ 0.01
CBX5P45973 MIR4674-201ENST00000582457 87 ntBASIC15.14■□□□□ 0.01
CBX5P45973 AC073648.6-201ENST00000641589 218 ntBASIC15.14■□□□□ 0.01
CBX5P45973 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.14■□□□□ 0.01
CBX5P45973 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.14■□□□□ 0.01
CBX5P45973 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.14■□□□□ 0.01
CBX5P45973 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.14■□□□□ 0.01
CBX5P45973 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CBX5P45973 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.13■□□□□ 0.01
CBX5P45973 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.13■□□□□ 0.01
CBX5P45973 AC097488.1-201ENST00000507834 756 ntBASIC15.13■□□□□ 0.01
CBX5P45973 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.13■□□□□ 0.01
CBX5P45973 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.13■□□□□ 0.01
CBX5P45973 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CBX5P45973 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.13■□□□□ 0.01
CBX5P45973 WWOX-216ENST00000569818 525 ntBASIC15.13■□□□□ 0.01
CBX5P45973 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.13■□□□□ 0.01
CBX5P45973 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CBX5P45973 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CBX5P45973 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX5P45973 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CBX5P45973 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.12■□□□□ 0.01
CBX5P45973 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.12■□□□□ 0.01
CBX5P45973 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.12■□□□□ 0.01
CBX5P45973 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
CBX5P45973 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
CBX5P45973 AL135905.2-201ENST00000584934 1404 ntBASIC15.12■□□□□ 0.01
CBX5P45973 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CBX5P45973 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX5P45973 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CBX5P45973 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.12■□□□□ 0.01
CBX5P45973 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CBX5P45973 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms