Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.68■□□□□ 0.42
CHRNA4P43681 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.68■□□□□ 0.42
CHRNA4P43681 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA4P43681 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA4P43681 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA4P43681 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CHRNA4P43681 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CHRNA4P43681 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHRNA4P43681 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNA4P43681 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHRNA4P43681 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA4P43681 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNA4P43681 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHRNA4P43681 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNA4P43681 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHRNA4P43681 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHRNA4P43681 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CHRNA4P43681 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA4P43681 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CHRNA4P43681 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHRNA4P43681 AC103564.2-201ENST00000432853 1299 ntBASIC17.67■□□□□ 0.42
CHRNA4P43681 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA4P43681 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHRNA4P43681 FOSL1P1-201ENST00000511041 816 ntBASIC17.67■□□□□ 0.42
CHRNA4P43681 IGHV3-52-201ENST00000519770 353 ntBASIC17.67■□□□□ 0.42
CHRNA4P43681 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA4P43681 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.67■□□□□ 0.42
CHRNA4P43681 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHRNA4P43681 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNA4P43681 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA4P43681 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNA4P43681 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA4P43681 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA4P43681 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNA4P43681 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CHRNA4P43681 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA4P43681 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHRNA4P43681 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNA4P43681 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHRNA4P43681 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNA4P43681 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHRNA4P43681 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CHRNA4P43681 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHRNA4P43681 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNA4P43681 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CHRNA4P43681 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNA4P43681 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA4P43681 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.66■□□□□ 0.42
CHRNA4P43681 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.66■□□□□ 0.42
CHRNA4P43681 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNA4P43681 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNA4P43681 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNA4P43681 AL353593.2-201ENST00000602529 1483 ntBASIC17.66■□□□□ 0.42
CHRNA4P43681 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHRNA4P43681 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHRNA4P43681 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA4P43681 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHRNA4P43681 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA4P43681 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA4P43681 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA4P43681 AC132938.5-201ENST00000624980 1813 ntBASIC17.65■□□□□ 0.42
CHRNA4P43681 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA4P43681 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA4P43681 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHRNA4P43681 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA4P43681 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA4P43681 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRNA4P43681 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA4P43681 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA4P43681 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA4P43681 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA4P43681 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms