Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL35P42766 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
RPL35P42766 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RPL35P42766 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.17□□□□□ -0.14
RPL35P42766 KRT8P45-201ENST00000414328 1447 ntBASIC14.17□□□□□ -0.14
RPL35P42766 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RPL35P42766 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.17□□□□□ -0.14
RPL35P42766 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.17□□□□□ -0.14
RPL35P42766 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.17□□□□□ -0.14
RPL35P42766 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.17□□□□□ -0.14
RPL35P42766 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.17□□□□□ -0.14
RPL35P42766 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.17□□□□□ -0.14
RPL35P42766 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
RPL35P42766 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.17□□□□□ -0.14
RPL35P42766 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.17□□□□□ -0.14
RPL35P42766 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RPL35P42766 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.17□□□□□ -0.14
RPL35P42766 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPL35P42766 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.16□□□□□ -0.14
RPL35P42766 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RPL35P42766 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.16□□□□□ -0.14
RPL35P42766 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.16□□□□□ -0.14
RPL35P42766 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.16□□□□□ -0.14
RPL35P42766 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.16□□□□□ -0.14
RPL35P42766 NTF6G-201ENST00000591094 616 ntBASIC14.16□□□□□ -0.14
RPL35P42766 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.16□□□□□ -0.14
RPL35P42766 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RPL35P42766 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.16□□□□□ -0.14
RPL35P42766 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RPL35P42766 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RPL35P42766 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.16□□□□□ -0.14
RPL35P42766 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RPL35P42766 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.16□□□□□ -0.14
RPL35P42766 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 AC006449.5-201ENST00000610658 2098 ntBASIC14.16□□□□□ -0.14
RPL35P42766 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.16□□□□□ -0.14
RPL35P42766 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPL35P42766 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RPL35P42766 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 AL513523.2-202ENST00000427283 2040 ntBASIC14.15□□□□□ -0.14
RPL35P42766 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPL35P42766 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms